| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99081519
Identifier: 99081519
GI number: 99081519
Start: 1776938
End: 1777294
Strand: Reverse
Name: 99081519
Synonym: TM1040_1678
Alternate gene names: NA
Gene position: 1777294-1776938 (Counterclockwise)
Preceding gene: 99081520
Following gene: 99081518
Centisome position: 55.52
GC content: 62.18
Gene sequence:
>357_bases ATGAAGTCCACCACCATTCGCCTCTCTTGGCCCCGCCGCGCCCTCTGGGACAATGAGAAGGCCAGCCACATGGTGAGGGC CGCAGCCAAGCGCACACAGCGCAAGGAGGCATGGGCACTAGCATTGGAAGCCAAGTGGCCGAGAGACCCAGCTGCGGTTC TCACGTTTCGTTTCTGCCCGCCTGATCGCCGCCGCCGCGACACCCACAATCTGCCAGCCACCATGAAGGCTGCCATCGAT GGGATTGCCGACGCGATGAAGGTTGATGACGTGGGGTTTCGCTGCGTGTTCCCGACAGAGTTTGGCCCCGTCGAGAAGGG CGGGGCGGTTTATATCGAGATTGGAGGCCAGCCATGA
Upstream 100 bases:
>100_bases TTTGCGGTGATGTTCCTAGGCTAGAGCTTTTCAGCCGCCAAGAGCGGACAGGCTGGGACGTGTTCGGGAACGAGGTCGAC AAGTTTCAGGGGGCGGCCGC
Downstream 100 bases:
>100_bases GCATCCGCATCATGTCAGCCGTTTTCGAAAGCGAAACACTGGGAGCCACAGAGCGTCTCATCATGCTCGCACTCGCTGAT CATGCTGACGACGAGGGCCG
Product: endodeoxyribonuclease RusA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MKSTTIRLSWPRRALWDNEKASHMVRAAAKRTQRKEAWALALEAKWPRDPAAVLTFRFCPPDRRRRDTHNLPATMKAAID GIADAMKVDDVGFRCVFPTEFGPVEKGGAVYIEIGGQP
Sequences:
>Translated_118_residues MKSTTIRLSWPRRALWDNEKASHMVRAAAKRTQRKEAWALALEAKWPRDPAAVLTFRFCPPDRRRRDTHNLPATMKAAID GIADAMKVDDVGFRCVFPTEFGPVEKGGAVYIEIGGQP >Mature_118_residues MKSTTIRLSWPRRALWDNEKASHMVRAAAKRTQRKEAWALALEAKWPRDPAAVLTFRFCPPDRRRRDTHNLPATMKAAID GIADAMKVDDVGFRCVFPTEFGPVEKGGAVYIEIGGQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13292; Mature: 13292
Theoretical pI: Translated: 10.60; Mature: 10.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSTTIRLSWPRRALWDNEKASHMVRAAAKRTQRKEAWALALEAKWPRDPAAVLTFRFCP CCCCEEEEECCCHHHCCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCEEEEEECCC PDRRRRDTHNLPATMKAAIDGIADAMKVDDVGFRCVFPTEFGPVEKGGAVYIEIGGQP CCCCCCCCCCCCHHHHHHHHHHHHHHEECCCCEEEECCCCCCCCCCCCEEEEEECCCC >Mature Secondary Structure MKSTTIRLSWPRRALWDNEKASHMVRAAAKRTQRKEAWALALEAKWPRDPAAVLTFRFCP CCCCEEEEECCCHHHCCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCEEEEEECCC PDRRRRDTHNLPATMKAAIDGIADAMKVDDVGFRCVFPTEFGPVEKGGAVYIEIGGQP CCCCCCCCCCCCHHHHHHHHHHHHHHEECCCCEEEECCCCCCCCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA