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The map label for this gene is ssb [H]

Identifier: 99081517

GI number: 99081517

Start: 1774948

End: 1775424

Strand: Reverse

Name: ssb [H]

Synonym: TM1040_1676

Alternate gene names: 99081517

Gene position: 1775424-1774948 (Counterclockwise)

Preceding gene: 99081518

Following gene: 99081516

Centisome position: 55.47

GC content: 58.07

Gene sequence:

>477_bases
ATGGCTGGATCGCTGAACAAAGTTATGCTGATAGGCAACCTTGGCCGCGATCCGGAAGTCCGGACCTTCCAGAGCGGAGG
CGAGGTCTGCAACCTCCGCATCGCGACCTCCGAATCTTGGAAAGACCGCAACACGGGCGAGCGCCGCGAAAAGACCGAAT
GGCACTCCGTTGCGATCTTTAATGAAGGTCTGGTGCGCGTGGCCGAGCAATACCTGCGCAAAGGGTCAAGGGTTTATGTC
GAAGGCCAGCTACAAACCCGCAAGTGGCAGGACCAGAGCGGTCAGGACCGCTATTCAACCGAGATCGTGTTGCATGGCTT
TGGCTCCACGCTAACCATGCTGGACGGGGCTGGAGGAACTCAGCAGTCCGGCTATGAAAATAGCGGCTACGGCGGTGGAT
ACGACTCCGATGGAACTCAGGGCAGCGGATACGGCTCTGACAGTCAGAGCATCGATGACGACGAGGTGCCTTTCTGA

Upstream 100 bases:

>100_bases
AGGCAGCACTTGGCTCGTACATCTATTCCCGTGGCCTTCGCTGGAATCGCGCGTCTCTGGACGCGGCATATCCCGAACTA
ACGTCTAAGGAGGCCGATTG

Downstream 100 bases:

>100_bases
TGGCTATGAGAGGACGCCCCCTGAAAGACCGCATGCCCCCAGAGTTCTGGGAGCGCGTCGAGGTCGCCCTCGTTGTTGGT
CAGGTCACGTTCACTGAGTG

Product: single-strand binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MAGSLNKVMLIGNLGRDPEVRTFQSGGEVCNLRIATSESWKDRNTGERREKTEWHSVAIFNEGLVRVAEQYLRKGSRVYV
EGQLQTRKWQDQSGQDRYSTEIVLHGFGSTLTMLDGAGGTQQSGYENSGYGGGYDSDGTQGSGYGSDSQSIDDDEVPF

Sequences:

>Translated_158_residues
MAGSLNKVMLIGNLGRDPEVRTFQSGGEVCNLRIATSESWKDRNTGERREKTEWHSVAIFNEGLVRVAEQYLRKGSRVYV
EGQLQTRKWQDQSGQDRYSTEIVLHGFGSTLTMLDGAGGTQQSGYENSGYGGGYDSDGTQGSGYGSDSQSIDDDEVPF
>Mature_157_residues
AGSLNKVMLIGNLGRDPEVRTFQSGGEVCNLRIATSESWKDRNTGERREKTEWHSVAIFNEGLVRVAEQYLRKGSRVYVE
GQLQTRKWQDQSGQDRYSTEIVLHGFGSTLTMLDGAGGTQQSGYENSGYGGGYDSDGTQGSGYGSDSQSIDDDEVPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Homo sapiens, GI4507231, Length=108, Percent_Identity=35.1851851851852, Blast_Score=77, Evalue=6e-15,
Organism=Escherichia coli, GI1790494, Length=115, Percent_Identity=60.8695652173913, Blast_Score=149, Evalue=1e-37,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 17359; Mature: 17228

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGSLNKVMLIGNLGRDPEVRTFQSGGEVCNLRIATSESWKDRNTGERREKTEWHSVAIF
CCCCCCEEEEEECCCCCCCCEEECCCCCEEEEEEECCCCCCCCCCCCCHHCCCCEEEEEE
NEGLVRVAEQYLRKGSRVYVEGQLQTRKWQDQSGQDRYSTEIVLHGFGSTLTMLDGAGGT
HHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCC
QQSGYENSGYGGGYDSDGTQGSGYGSDSQSIDDDEVPF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AGSLNKVMLIGNLGRDPEVRTFQSGGEVCNLRIATSESWKDRNTGERREKTEWHSVAIF
CCCCCEEEEEECCCCCCCCEEECCCCCEEEEEEECCCCCCCCCCCCCHHCCCCEEEEEE
NEGLVRVAEQYLRKGSRVYVEGQLQTRKWQDQSGQDRYSTEIVLHGFGSTLTMLDGAGGT
HHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCC
QQSGYENSGYGGGYDSDGTQGSGYGSDSQSIDDDEVPF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA