| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99081515
Identifier: 99081515
GI number: 99081515
Start: 1774102
End: 1774671
Strand: Reverse
Name: 99081515
Synonym: TM1040_1674
Alternate gene names: NA
Gene position: 1774671-1774102 (Counterclockwise)
Preceding gene: 99081516
Following gene: 99081513
Centisome position: 55.44
GC content: 61.4
Gene sequence:
>570_bases ATGACGTGGTATCTGGGCAGAACGACCACCCGGCACATCGCACCCGAACCCGGCGCCGAAAAAGAGCGCGGAGAGTTCGC GGTGGAGCGCCAGCTGCGCGCGTTGGGCATCGAGGCCCACGCCCCCCGCAGGATCGAGTTTAAGCGGGTCGGCAAGAAGC GCCACGCCGAACCGATCACAAGCGCGTATCTGCCGGGATACATCTTCGCAGAGATCCCTGCGTCCATGTTTACCCGCGCG ATCCAATGCCGAGGGTTGAGCGCTTCCCTCATGGCTGTGCCGGCCCAAGAAGTCTTGCACCATGTAAAACCCTTCATCGC CAAGGTGAAATCAGAGAACGCTGATGCAGAACGGATCATCGAAAGCCGCGATCGCGCTGCAATGTGCCAGTTTCAGCCGG GGGAGGCGCTCGACGTTCTGGCTGGCCCCTTCGCTGAGCGACTGGTGAAGTTCACCCGGATGGTTGAGGCTGCACACGAC TCATACCCGATGATCGAGGCGCAGATCGAGATCCTCGGTCGCCTGACGCGCGTGAAGATTGATCCGCTGGATGTGCGAGC TGCCTCTTGA
Upstream 100 bases:
>100_bases ATCGACGCTCTCTGCGCTCTCACTGGATGCACGCGCGAGTTCCTGTTCAATCCGGAACCCGTAGACCTCAGCAAATAACC AAAGGCAGGAGACAGGCAAA
Downstream 100 bases:
>100_bases TGCAATCCCAAGATGTGGTATTCTCTTCGCAAGGTCGCACCAGGATCGCTCCGGTCGGCCCGTCCACGCGCCCCCGGTTT CGGAACTGAGGAAAGGGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MTWYLGRTTTRHIAPEPGAEKERGEFAVERQLRALGIEAHAPRRIEFKRVGKKRHAEPITSAYLPGYIFAEIPASMFTRA IQCRGLSASLMAVPAQEVLHHVKPFIAKVKSENADAERIIESRDRAAMCQFQPGEALDVLAGPFAERLVKFTRMVEAAHD SYPMIEAQIEILGRLTRVKIDPLDVRAAS
Sequences:
>Translated_189_residues MTWYLGRTTTRHIAPEPGAEKERGEFAVERQLRALGIEAHAPRRIEFKRVGKKRHAEPITSAYLPGYIFAEIPASMFTRA IQCRGLSASLMAVPAQEVLHHVKPFIAKVKSENADAERIIESRDRAAMCQFQPGEALDVLAGPFAERLVKFTRMVEAAHD SYPMIEAQIEILGRLTRVKIDPLDVRAAS >Mature_188_residues TWYLGRTTTRHIAPEPGAEKERGEFAVERQLRALGIEAHAPRRIEFKRVGKKRHAEPITSAYLPGYIFAEIPASMFTRAI QCRGLSASLMAVPAQEVLHHVKPFIAKVKSENADAERIIESRDRAAMCQFQPGEALDVLAGPFAERLVKFTRMVEAAHDS YPMIEAQIEILGRLTRVKIDPLDVRAAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21176; Mature: 21045
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTWYLGRTTTRHIAPEPGAEKERGEFAVERQLRALGIEAHAPRRIEFKRVGKKRHAEPIT CEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHH SAYLPGYIFAEIPASMFTRAIQCRGLSASLMAVPAQEVLHHVKPFIAKVKSENADAERII HHHCCCHHHHHCCHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHH ESRDRAAMCQFQPGEALDVLAGPFAERLVKFTRMVEAAHDSYPMIEAQIEILGRLTRVKI HHCCCCEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEE DPLDVRAAS CCCCCEECC >Mature Secondary Structure TWYLGRTTTRHIAPEPGAEKERGEFAVERQLRALGIEAHAPRRIEFKRVGKKRHAEPIT EEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHH SAYLPGYIFAEIPASMFTRAIQCRGLSASLMAVPAQEVLHHVKPFIAKVKSENADAERII HHHCCCHHHHHCCHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHH ESRDRAAMCQFQPGEALDVLAGPFAERLVKFTRMVEAAHDSYPMIEAQIEILGRLTRVKI HHCCCCEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEE DPLDVRAAS CCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA