Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99081508

Identifier: 99081508

GI number: 99081508

Start: 1766958

End: 1767530

Strand: Reverse

Name: 99081508

Synonym: TM1040_1667

Alternate gene names: NA

Gene position: 1767530-1766958 (Counterclockwise)

Preceding gene: 99081509

Following gene: 99081507

Centisome position: 55.22

GC content: 67.36

Gene sequence:

>573_bases
GTGAAGTTCCGCCCCATTCTCACCGCGCCCCCGGCCGAAAGCCCCGTCACGCTGGACGAGGTGAAGGCACAGGCAACCGT
CGATTTCGCCGACGATGATGCCCTTCTGACCGGCCTGCGGGACGCGGCTGTTGCGTATCTTGACGGCTTCCGCGGCGTTC
TGGGGCGGGCCATGGTCACGCAGACGTGGCAGGTGCAGCGTGCGTCCTGGGCGCGCGAAATGTGCCTGCCGGTGCCGGAT
GTTTCCGCCGTGGCGATCAGTTACGCGGATGCGGAAGGGGCCGAGCAGACGGTTGCGGCGGAGCATGTCGACCGGCTTCC
GGTCGCGACCGGCACGCTGGTTCACCTGTCCGATGATTTCGGCCTACCGACGCTGGAGAGCGGCAACCCGGCGCCGATCA
CCGTGCAATTCACCTGCGGGTTTGGTGCGGCGGCCGATGTGCCGGCGAACCTGAAACTGGCAGTCAAGGCGCTGGCAGCC
ACATGGTACGAGACCCGCACCACGGAGCCGAGCGAGGCGCTGCCGATGGGTGTCGAGGCGCTAATCCGGCCCTATCGCTG
GGTGGCGATCTGA

Upstream 100 bases:

>100_bases
CTGACGTGGCTCACCTCGTTGTCAACGGCGTCCTGCGTAAGAAGGCGCCGGAAGTCCTGAACAAGGCCCGCGCTGTGCCG
AAGAACAAGGCGCGCGGCAA

Downstream 100 bases:

>100_bases
TGAGGCTGATCGAGCGCGTGGCCTTTGACGAGCTTGTCGGCGGCGGTGACAGCTTCGGTGGGAAAGACAAAGAGCCGATT
GAGCGCTTCAGCACCCGCGC

Product: phiE125 gp8 hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MKFRPILTAPPAESPVTLDEVKAQATVDFADDDALLTGLRDAAVAYLDGFRGVLGRAMVTQTWQVQRASWAREMCLPVPD
VSAVAISYADAEGAEQTVAAEHVDRLPVATGTLVHLSDDFGLPTLESGNPAPITVQFTCGFGAAADVPANLKLAVKALAA
TWYETRTTEPSEALPMGVEALIRPYRWVAI

Sequences:

>Translated_190_residues
MKFRPILTAPPAESPVTLDEVKAQATVDFADDDALLTGLRDAAVAYLDGFRGVLGRAMVTQTWQVQRASWAREMCLPVPD
VSAVAISYADAEGAEQTVAAEHVDRLPVATGTLVHLSDDFGLPTLESGNPAPITVQFTCGFGAAADVPANLKLAVKALAA
TWYETRTTEPSEALPMGVEALIRPYRWVAI
>Mature_190_residues
MKFRPILTAPPAESPVTLDEVKAQATVDFADDDALLTGLRDAAVAYLDGFRGVLGRAMVTQTWQVQRASWAREMCLPVPD
VSAVAISYADAEGAEQTVAAEHVDRLPVATGTLVHLSDDFGLPTLESGNPAPITVQFTCGFGAAADVPANLKLAVKALAA
TWYETRTTEPSEALPMGVEALIRPYRWVAI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20267; Mature: 20267

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFRPILTAPPAESPVTLDEVKAQATVDFADDDALLTGLRDAAVAYLDGFRGVLGRAMVT
CCCCCCCCCCCCCCCCCHHHHHCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QTWQVQRASWAREMCLPVPDVSAVAISYADAEGAEQTVAAEHVDRLPVATGTLVHLSDDF
HHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEEEECCC
GLPTLESGNPAPITVQFTCGFGAAADVPANLKLAVKALAATWYETRTTEPSEALPMGVEA
CCCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHCCCCHHH
LIRPYRWVAI
HHCCEEEEEC
>Mature Secondary Structure
MKFRPILTAPPAESPVTLDEVKAQATVDFADDDALLTGLRDAAVAYLDGFRGVLGRAMVT
CCCCCCCCCCCCCCCCCHHHHHCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QTWQVQRASWAREMCLPVPDVSAVAISYADAEGAEQTVAAEHVDRLPVATGTLVHLSDDF
HHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEEEECCC
GLPTLESGNPAPITVQFTCGFGAAADVPANLKLAVKALAATWYETRTTEPSEALPMGVEA
CCCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHCCCCHHH
LIRPYRWVAI
HHCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA