Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99081506

Identifier: 99081506

GI number: 99081506

Start: 1766168

End: 1766623

Strand: Reverse

Name: 99081506

Synonym: TM1040_1665

Alternate gene names: NA

Gene position: 1766623-1766168 (Counterclockwise)

Preceding gene: 99081507

Following gene: 99081505

Centisome position: 55.19

GC content: 59.65

Gene sequence:

>456_bases
ATGAAGGCGTCATTCAAGGTCGAGGGGCTTCGAGAGATCGACAATGCACTGGCGGCGCTGCCCAAGGCCACCTCCAAGGC
GGTTGTGCGCCGCGCGCTGTCGAAGGAGCTGCAGCCGGTCGCAGATATGGCGAACGGGCTATGGCCTGGCGCCGACGACA
GTGCATTCGCTGTTTCCTCCAAGCTCAAGAGAAACCTGCAAAAAGCCAAAAGCAGCACCACTGCGGTGACTATGTATGTT
GGCGCAACTCCTTCCGCACCTCACTCGCATCTACTGGAATTTGGCACAGAGCCTCGCTTTCACGAAAGCGGAAAGTACGT
TGGTGCGGTCTCGCCTCGACCGATGTTGACACCTTCCTGGGATGCATTCCGTGGGCAGATCCTAGAGGGACTGGCCGCGT
CCTTGCGAGAAGAGATCGAGGCGACCCTGGCGCGCCGCGCAAAGCGAGGCTTCTAA

Upstream 100 bases:

>100_bases
TGCGGGATATCGGTAAGGGCACTGTTTACAACATCCGCGCGGTGGAGCCGAACCGGGAAAAGCCGCGCCAGTATCTAGAT
TTCATCTGCGAGAGTGGCAC

Downstream 100 bases:

>100_bases
TGGAAGAGCACCTGTATTCAACTCTCTCCGACGCCCTGAGTTGCCCGGTGAAGTGGGGCTTCTTCAGCGATGGGGAGACC
ATGCCACGCGTGACCATGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MKASFKVEGLREIDNALAALPKATSKAVVRRALSKELQPVADMANGLWPGADDSAFAVSSKLKRNLQKAKSSTTAVTMYV
GATPSAPHSHLLEFGTEPRFHESGKYVGAVSPRPMLTPSWDAFRGQILEGLAASLREEIEATLARRAKRGF

Sequences:

>Translated_151_residues
MKASFKVEGLREIDNALAALPKATSKAVVRRALSKELQPVADMANGLWPGADDSAFAVSSKLKRNLQKAKSSTTAVTMYV
GATPSAPHSHLLEFGTEPRFHESGKYVGAVSPRPMLTPSWDAFRGQILEGLAASLREEIEATLARRAKRGF
>Mature_151_residues
MKASFKVEGLREIDNALAALPKATSKAVVRRALSKELQPVADMANGLWPGADDSAFAVSSKLKRNLQKAKSSTTAVTMYV
GATPSAPHSHLLEFGTEPRFHESGKYVGAVSPRPMLTPSWDAFRGQILEGLAASLREEIEATLARRAKRGF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16294; Mature: 16294

Theoretical pI: Translated: 10.61; Mature: 10.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKASFKVEGLREIDNALAALPKATSKAVVRRALSKELQPVADMANGLWPGADDSAFAVSS
CCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
KLKRNLQKAKSSTTAVTMYVGATPSAPHSHLLEFGTEPRFHESGKYVGAVSPRPMLTPSW
HHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCH
DAFRGQILEGLAASLREEIEATLARRAKRGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKASFKVEGLREIDNALAALPKATSKAVVRRALSKELQPVADMANGLWPGADDSAFAVSS
CCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
KLKRNLQKAKSSTTAVTMYVGATPSAPHSHLLEFGTEPRFHESGKYVGAVSPRPMLTPSW
HHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCH
DAFRGQILEGLAASLREEIEATLARRAKRGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA