Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99081501

Identifier: 99081501

GI number: 99081501

Start: 1763994

End: 1764332

Strand: Reverse

Name: 99081501

Synonym: TM1040_1660

Alternate gene names: NA

Gene position: 1764332-1763994 (Counterclockwise)

Preceding gene: 99081502

Following gene: 99081500

Centisome position: 55.12

GC content: 60.47

Gene sequence:

>339_bases
TTGCCTGATATATCCGGGGTCGAATACCTTCTGGACATGATGGCGCAGGAGGGCCTTGGCTGGTGCTCCTTCGATCAGAT
GGGTGGTGCTGAGCCGGTCGCTTGGTCCGAGATCCGGGCCTTCTCGAAAGAGTCGGGCCTTAATCTTGAGCCGTGGGAGG
CCAAGCAGGTCCGCGCGATGAGCGTGTCATATGTCGCCGGTATGGCGCGAGGCCAGAGGCCTATGCAGGTTTCTCCAGCC
TATGACGACAGGCCGGATAACGATCCTGGCGTTGCGATGGAGCGCAAGAAGCTTTCGGACAAAGTGGGCGCGGCTCTGTC
TGCAATGGCGGGGTCGTGA

Upstream 100 bases:

>100_bases
GACGCTCTATGCAGCCCAGGCCGGTTTCCTTGCAGCAAGGCCTGAAGAATGGAAAACCAGCCGCTTCAAGCTCTGGCAGA
GAGAGGGCATCGACTTCGCA

Downstream 100 bases:

>100_bases
CTCGACATGTGAGTGTCACGTCCCTAAAGTTCTGCTTTCCAGGAGCCGATTTTACGAGGCCGGGCCATGCAAAAAGCTAA
GGAAAAGCCAGAAACAAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 111

Protein sequence:

>112_residues
MPDISGVEYLLDMMAQEGLGWCSFDQMGGAEPVAWSEIRAFSKESGLNLEPWEAKQVRAMSVSYVAGMARGQRPMQVSPA
YDDRPDNDPGVAMERKKLSDKVGAALSAMAGS

Sequences:

>Translated_112_residues
MPDISGVEYLLDMMAQEGLGWCSFDQMGGAEPVAWSEIRAFSKESGLNLEPWEAKQVRAMSVSYVAGMARGQRPMQVSPA
YDDRPDNDPGVAMERKKLSDKVGAALSAMAGS
>Mature_111_residues
PDISGVEYLLDMMAQEGLGWCSFDQMGGAEPVAWSEIRAFSKESGLNLEPWEAKQVRAMSVSYVAGMARGQRPMQVSPAY
DDRPDNDPGVAMERKKLSDKVGAALSAMAGS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12117; Mature: 11986

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
8.0 %Met     (Translated Protein)
8.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
7.2 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDISGVEYLLDMMAQEGLGWCSFDQMGGAEPVAWSEIRAFSKESGLNLEPWEAKQVRAM
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHH
SVSYVAGMARGQRPMQVSPAYDDRPDNDPGVAMERKKLSDKVGAALSAMAGS
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PDISGVEYLLDMMAQEGLGWCSFDQMGGAEPVAWSEIRAFSKESGLNLEPWEAKQVRAM
CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHH
SVSYVAGMARGQRPMQVSPAYDDRPDNDPGVAMERKKLSDKVGAALSAMAGS
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA