Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99081495

Identifier: 99081495

GI number: 99081495

Start: 1754832

End: 1755464

Strand: Reverse

Name: 99081495

Synonym: TM1040_1654

Alternate gene names: NA

Gene position: 1755464-1754832 (Counterclockwise)

Preceding gene: 99081496

Following gene: 99081494

Centisome position: 54.84

GC content: 58.77

Gene sequence:

>633_bases
ATGACTTACGCTTTGGTTCGAGACGGCGTCTTGATTCAATACCCTTATTCCCTCGAAGACCTTCGTCGCGACAACCCTCG
CTTGAGCCTGCCGCTCACCCTTCCCAGCTTCAAGCTGGCAGAGTATGGCATGCTCCCGGTCTTGATCGCAGAGCGACCCA
CCCAAGCGATGGACGAAACGGCAGTTCTGTCAGAGACTCCTGAGCTTGTAGAAGGGCAATGGGTTCTTGGCTGGACGGTG
CGGGCAAAGACACCCGAAGAGGTCGCAGCCGAACGCCAAAAAATGCGAGCAAGGGTAAACGCAGAACGTGCTCGACGTCT
GGTCGCTGGCACGAAAGTGACCGTGACCGGTAACGGCCCTGTGGCCCTTTCGGGGCGCGACGAAGATACACGGAACCTTC
AGGGTCTCGCTTTCGCGGCACAGCTTCGGTTGGCAGATGGCAATACCACGCACCAGACCACTTTCAGGGACGCCGAGAAC
GTCGATCACGTTCTGACGCCCGCGCAGGTACTGGAAATGTGGTCCTTGGGCTCTGCATGGATCGAACAGGTCTATGCCGC
GAGTTGGGCGCTGAAGGACACGCAAGGCGGCATCCCGGCAGACTACGCCAATGACGGGTATTGGCCGCAGTAA

Upstream 100 bases:

>100_bases
CCCCTACAGTTGCGTCAGGTGGCGACTCGGATCTGATAGACTTCACCACTTATGATGGAGGTGTCGTCTTTTACGGCACG
AAGCGAGGAGACACTTACTC

Downstream 100 bases:

>100_bases
CTGGTACATCCGCCACGGGGACGGATACTTCACCACAACTGAACTCGCATGGGAGATTGGAGCCAAGGGCTCCGGTCTCT
TTATTTACGTGCCTCCGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 210; Mature: 209

Protein sequence:

>210_residues
MTYALVRDGVLIQYPYSLEDLRRDNPRLSLPLTLPSFKLAEYGMLPVLIAERPTQAMDETAVLSETPELVEGQWVLGWTV
RAKTPEEVAAERQKMRARVNAERARRLVAGTKVTVTGNGPVALSGRDEDTRNLQGLAFAAQLRLADGNTTHQTTFRDAEN
VDHVLTPAQVLEMWSLGSAWIEQVYAASWALKDTQGGIPADYANDGYWPQ

Sequences:

>Translated_210_residues
MTYALVRDGVLIQYPYSLEDLRRDNPRLSLPLTLPSFKLAEYGMLPVLIAERPTQAMDETAVLSETPELVEGQWVLGWTV
RAKTPEEVAAERQKMRARVNAERARRLVAGTKVTVTGNGPVALSGRDEDTRNLQGLAFAAQLRLADGNTTHQTTFRDAEN
VDHVLTPAQVLEMWSLGSAWIEQVYAASWALKDTQGGIPADYANDGYWPQ
>Mature_209_residues
TYALVRDGVLIQYPYSLEDLRRDNPRLSLPLTLPSFKLAEYGMLPVLIAERPTQAMDETAVLSETPELVEGQWVLGWTVR
AKTPEEVAAERQKMRARVNAERARRLVAGTKVTVTGNGPVALSGRDEDTRNLQGLAFAAQLRLADGNTTHQTTFRDAENV
DHVLTPAQVLEMWSLGSAWIEQVYAASWALKDTQGGIPADYANDGYWPQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23326; Mature: 23194

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYALVRDGVLIQYPYSLEDLRRDNPRLSLPLTLPSFKLAEYGMLPVLIAERPTQAMDET
CCEEEEECCEEEEECCCHHHHHCCCCCEEEEEECCCCHHHHCCCCEEEEECCCCHHHHHH
AVLSETPELVEGQWVLGWTVRAKTPEEVAAERQKMRARVNAERARRLVAGTKVTVTGNGP
HHHHCCHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHHCHHHHHHHHCCCEEEEECCCC
VALSGRDEDTRNLQGLAFAAQLRLADGNTTHQTTFRDAENVDHVLTPAQVLEMWSLGSAW
EEECCCCCCCCCCCCEEEEEEEEECCCCCCCCEECCCCCCCHHHCCHHHHHHHHCCCHHH
IEQVYAASWALKDTQGGIPADYANDGYWPQ
HHHHHHHHHEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TYALVRDGVLIQYPYSLEDLRRDNPRLSLPLTLPSFKLAEYGMLPVLIAERPTQAMDET
CEEEEECCEEEEECCCHHHHHCCCCCEEEEEECCCCHHHHCCCCEEEEECCCCHHHHHH
AVLSETPELVEGQWVLGWTVRAKTPEEVAAERQKMRARVNAERARRLVAGTKVTVTGNGP
HHHHCCHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHHCHHHHHHHHCCCEEEEECCCC
VALSGRDEDTRNLQGLAFAAQLRLADGNTTHQTTFRDAENVDHVLTPAQVLEMWSLGSAW
EEECCCCCCCCCCCCEEEEEEEEECCCCCCCCEECCCCCCCHHHCCHHHHHHHHCCCHHH
IEQVYAASWALKDTQGGIPADYANDGYWPQ
HHHHHHHHHEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA