| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99081467
Identifier: 99081467
GI number: 99081467
Start: 1734086
End: 1734631
Strand: Reverse
Name: 99081467
Synonym: TM1040_1626
Alternate gene names: NA
Gene position: 1734631-1734086 (Counterclockwise)
Preceding gene: 99081470
Following gene: 99081466
Centisome position: 54.19
GC content: 57.69
Gene sequence:
>546_bases ATGTGGAGAATTTTTTTGGCCGAGAATGAAAATCCCGACGCCTTTGACCTCTTTGGGAACCCTGTCTTTTCCACCAAAGG AAAGCGGGGACGTCCCAAGTTCCAAAGGACTGAGGAAAATGCACGTAAAGTCAGTATGTTACTTGGCTTGGGCTGGTCGA ATGGTCGAATTGCCTCCTGCATCGTGGATCCGCGCACGGGCAATGCGATCTCGGAGCCGACGCTAAAGCGGTATTTTAGA TCCGAGCTCGGTGAGCGGAACAAAATGCGAGATCGGCTCGAGGCGCGGCGGTTCGAGCGGACCTGGGCGGCGGCCGAGGC AGGCAACATCGGGGCCGAGCGGCTTTTGATGCAGATGCTGGAAAAGAACGACCTGATGGGGGCCAGCCGACGCCTCGATG ATGCTCAGTCGAGCAAGGATGCTGCGAAGCCCGATCGAGAAACAAAGCTCGGTAAGAAAGAGGCCGCGCGACAGGCGGCG CATGAAAGCGCTGAGGATAGCGAATGGGGCGCGGATCTCGATCTGCCCGGATTTCGCCCGAACTGA
Upstream 100 bases:
>100_bases AGGGAGAAACAGCGCACTGAGGCCGCCGAGCGGATCGCCGGGGGCATAGGGGGGGGCTGATCCCTCCAGGGGGCGGAATA CCCAAACCGGCGCCTATCTC
Downstream 100 bases:
>100_bases GGTTTGATCCATGCTCGATGCGTTCATTGATCCTGCTGAGCGGGCGGCTTGGTCCACGGCGGTTCCGGACTGGGAAGAGC GGATCCTCAATCGGCAATCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MWRIFLAENENPDAFDLFGNPVFSTKGKRGRPKFQRTEENARKVSMLLGLGWSNGRIASCIVDPRTGNAISEPTLKRYFR SELGERNKMRDRLEARRFERTWAAAEAGNIGAERLLMQMLEKNDLMGASRRLDDAQSSKDAAKPDRETKLGKKEAARQAA HESAEDSEWGADLDLPGFRPN
Sequences:
>Translated_181_residues MWRIFLAENENPDAFDLFGNPVFSTKGKRGRPKFQRTEENARKVSMLLGLGWSNGRIASCIVDPRTGNAISEPTLKRYFR SELGERNKMRDRLEARRFERTWAAAEAGNIGAERLLMQMLEKNDLMGASRRLDDAQSSKDAAKPDRETKLGKKEAARQAA HESAEDSEWGADLDLPGFRPN >Mature_181_residues MWRIFLAENENPDAFDLFGNPVFSTKGKRGRPKFQRTEENARKVSMLLGLGWSNGRIASCIVDPRTGNAISEPTLKRYFR SELGERNKMRDRLEARRFERTWAAAEAGNIGAERLLMQMLEKNDLMGASRRLDDAQSSKDAAKPDRETKLGKKEAARQAA HESAEDSEWGADLDLPGFRPN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20485; Mature: 20485
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWRIFLAENENPDAFDLFGNPVFSTKGKRGRPKFQRTEENARKVSMLLGLGWSNGRIASC CEEEEEECCCCCCEEECCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEE IVDPRTGNAISEPTLKRYFRSELGERNKMRDRLEARRFERTWAAAEAGNIGAERLLMQML EECCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH EKNDLMGASRRLDDAQSSKDAAKPDRETKLGKKEAARQAAHESAEDSEWGADLDLPGFRP HHHCCCHHHHHCCHHHHCCCCCCCCHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC N C >Mature Secondary Structure MWRIFLAENENPDAFDLFGNPVFSTKGKRGRPKFQRTEENARKVSMLLGLGWSNGRIASC CEEEEEECCCCCCEEECCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEE IVDPRTGNAISEPTLKRYFRSELGERNKMRDRLEARRFERTWAAAEAGNIGAERLLMQML EECCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH EKNDLMGASRRLDDAQSSKDAAKPDRETKLGKKEAARQAAHESAEDSEWGADLDLPGFRP HHHCCCHHHHHCCHHHHCCCCCCCCHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC N C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA