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The map label for this gene is ymfO [C]

Identifier: 99081465

GI number: 99081465

Start: 1731086

End: 1732372

Strand: Reverse

Name: ymfO [C]

Synonym: TM1040_1624

Alternate gene names: 99081465

Gene position: 1732372-1731086 (Counterclockwise)

Preceding gene: 99081466

Following gene: 99081464

Centisome position: 54.12

GC content: 58.28

Gene sequence:

>1287_bases
ATGGGAATTTTTGATTTCCTTCGGCCAGCGGCGACGCTGGCTGAACCAGCCGTGCGCGCTGAACCACCGGTGTCTGCAGC
TTCAGACACCTCGGTTTCGAGCGAACGTCAATGGAAGGGTTTTGTCGTTGCGGGCGGTCGATCAAAGGCCGGCGTGCCGG
TGAGCGAAACCACCGCCTTGACCATTCCAGCCACCTTGCAGGCGCTTCGGATCTTGACCGGCGTCTTTGCGATGACGCCG
CTGCATTTTTACCAGAAGACCGACAGGGGGCGGATGTCGGCCGAAGGCAACCCGGCGGCGCAGTTGTTTCGGCTGGGTCC
AAACAGTCACCAGACTGCCTATGCGTTCTTTGAGCTCTTGTTGGCGGACATCCTGTTGACCGGGAATTTCTACGGCTATG
TCAGCCGGGATTTTCGGGGCGAGGTGAAGGCGGTGACCCGGCTGAAGCCCGGCCAGTGTCAGCCGGTCGAATATTTCGAT
CGCGCCGAAGGATCGATCCTTTTTTTCGATGCCACCTTGCCGGATGGAAGCCATGAGCGTTTCCCGGCGCGTGATATCTT
TCACGTTGGCGGGTTCTCTCGGGATGGGGTTCAGGGTCTCAACCCCGTGCAATACGCACGTGATGCCTTGGGCGGTGCAA
TTGCAACAGCGGATCACGCGGCTCGGTTCTGGAACAAGGGCGGGCGCCCTTCGACGGTGCTGACCAGCGAGAAAGCCATT
GGGCCTACCGATAAGGATCGGATCAAGACCGACTGGACCCAAATGTATTCGGGTCCAGACGCCGATATGGTTGCTGTCCT
CGATCAAGATCTAAAGGCCGAGTTCTTGGCTCATGATTTGAAATCCAGCCAATATCTGGAAACGCGACAGTTTCAGGTGG
TCGATCTCGCCCGAATCTGGGGTGTGCCGCCGCACCTGATCTTTGATTTGTCGCGCGCCACCTTCGGTAACATCGAGCAA
CAAAGCCTCGAGTTCGTCATCTATCACTTGGGCCCCCATTACACGCGGGTTGCCCAGGCCGCGACTAAGGCCTTTGCCAA
GATCGGGTTCTACTTTGAGCATGTCACTGCCGAGCTAGTCAAAGGCGACCTGAAGAGCAGGATGGAGGCTTATTGGCTGC
AACGCCAGATGGGCATGGTGAACGGCAACGAACTGCGCAGCTACGAGAACCTTCCCAACATCGAAGGCAATGCGGGGACG
GACTACTGGATGCCGGCGAACATGCAAGTAGCCGGAGCATCTGCGGCGCCGGGCAGCACCGAAGACACCAGCGGAGACCA
ATCATGA

Upstream 100 bases:

>100_bases
AGATCGACCCCCTGATTGCCGGCATGAACGCCTTTACCTTGATGAGCCGCAATCCGGTTGCGGCGGGGTCCAAGACCTTC
GTTTACAACGGGATGTGAGA

Downstream 100 bases:

>100_bases
AACAGGAATTGACGGCGCTGGTTGCGGCCATTCGGGCGCAGCCCTGGGCGATCATGCCGGATTATCTCGATGCGATCGAA
GCCATCGCGCTGCGCGCCCT

Product: Phage portal protein, HK97

Products: NA

Alternate protein names: HK97 Family Phage Portal Protein; Portal Protein; Phage Portal Protein HK; Head Portal Protein; HK97 Family Portal Protein; Phage-Related Portal Protein; HK97 Family Portal Protein ; Phage-Related Protein; Phage Capsid Protein HK; Prophage; Phage-Like Protein; Bacteriophage Portal Protein; Phage-Related Head Portal Protein; Phage Related Head Portal Protein

Number of amino acids: Translated: 428; Mature: 427

Protein sequence:

>428_residues
MGIFDFLRPAATLAEPAVRAEPPVSAASDTSVSSERQWKGFVVAGGRSKAGVPVSETTALTIPATLQALRILTGVFAMTP
LHFYQKTDRGRMSAEGNPAAQLFRLGPNSHQTAYAFFELLLADILLTGNFYGYVSRDFRGEVKAVTRLKPGQCQPVEYFD
RAEGSILFFDATLPDGSHERFPARDIFHVGGFSRDGVQGLNPVQYARDALGGAIATADHAARFWNKGGRPSTVLTSEKAI
GPTDKDRIKTDWTQMYSGPDADMVAVLDQDLKAEFLAHDLKSSQYLETRQFQVVDLARIWGVPPHLIFDLSRATFGNIEQ
QSLEFVIYHLGPHYTRVAQAATKAFAKIGFYFEHVTAELVKGDLKSRMEAYWLQRQMGMVNGNELRSYENLPNIEGNAGT
DYWMPANMQVAGASAAPGSTEDTSGDQS

Sequences:

>Translated_428_residues
MGIFDFLRPAATLAEPAVRAEPPVSAASDTSVSSERQWKGFVVAGGRSKAGVPVSETTALTIPATLQALRILTGVFAMTP
LHFYQKTDRGRMSAEGNPAAQLFRLGPNSHQTAYAFFELLLADILLTGNFYGYVSRDFRGEVKAVTRLKPGQCQPVEYFD
RAEGSILFFDATLPDGSHERFPARDIFHVGGFSRDGVQGLNPVQYARDALGGAIATADHAARFWNKGGRPSTVLTSEKAI
GPTDKDRIKTDWTQMYSGPDADMVAVLDQDLKAEFLAHDLKSSQYLETRQFQVVDLARIWGVPPHLIFDLSRATFGNIEQ
QSLEFVIYHLGPHYTRVAQAATKAFAKIGFYFEHVTAELVKGDLKSRMEAYWLQRQMGMVNGNELRSYENLPNIEGNAGT
DYWMPANMQVAGASAAPGSTEDTSGDQS
>Mature_427_residues
GIFDFLRPAATLAEPAVRAEPPVSAASDTSVSSERQWKGFVVAGGRSKAGVPVSETTALTIPATLQALRILTGVFAMTPL
HFYQKTDRGRMSAEGNPAAQLFRLGPNSHQTAYAFFELLLADILLTGNFYGYVSRDFRGEVKAVTRLKPGQCQPVEYFDR
AEGSILFFDATLPDGSHERFPARDIFHVGGFSRDGVQGLNPVQYARDALGGAIATADHAARFWNKGGRPSTVLTSEKAIG
PTDKDRIKTDWTQMYSGPDADMVAVLDQDLKAEFLAHDLKSSQYLETRQFQVVDLARIWGVPPHLIFDLSRATFGNIEQQ
SLEFVIYHLGPHYTRVAQAATKAFAKIGFYFEHVTAELVKGDLKSRMEAYWLQRQMGMVNGNELRSYENLPNIEGNAGTD
YWMPANMQVAGASAAPGSTEDTSGDQS

Specific function: Unknown

COG id: COG4695

COG function: function code S; Phage-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46989; Mature: 46858

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIFDFLRPAATLAEPAVRAEPPVSAASDTSVSSERQWKGFVVAGGRSKAGVPVSETTAL
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEE
TIPATLQALRILTGVFAMTPLHFYQKTDRGRMSAEGNPAAQLFRLGPNSHQTAYAFFELL
ECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHEECCCCCCHHHHHHHHHH
LADILLTGNFYGYVSRDFRGEVKAVTRLKPGQCQPVEYFDRAEGSILFFDATLPDGSHER
HHHHHHHCCCEEEECCCCCCCHHHHHCCCCCCCCCHHHHHCCCCCEEEEEECCCCCCCCC
FPARDIFHVGGFSRDGVQGLNPVQYARDALGGAIATADHAARFWNKGGRPSTVLTSEKAI
CCCHHHHCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEECCCCC
GPTDKDRIKTDWTQMYSGPDADMVAVLDQDLKAEFLAHDLKSSQYLETRQFQVVDLARIW
CCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHC
GVPPHLIFDLSRATFGNIEQQSLEFVIYHLGPHYTRVAQAATKAFAKIGFYFEHVTAELV
CCCHHHHEECHHHHCCCCCHHCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KGDLKSRMEAYWLQRQMGMVNGNELRSYENLPNIEGNAGTDYWMPANMQVAGASAAPGST
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCC
EDTSGDQS
CCCCCCCC
>Mature Secondary Structure 
GIFDFLRPAATLAEPAVRAEPPVSAASDTSVSSERQWKGFVVAGGRSKAGVPVSETTAL
CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEE
TIPATLQALRILTGVFAMTPLHFYQKTDRGRMSAEGNPAAQLFRLGPNSHQTAYAFFELL
ECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHEECCCCCCHHHHHHHHHH
LADILLTGNFYGYVSRDFRGEVKAVTRLKPGQCQPVEYFDRAEGSILFFDATLPDGSHER
HHHHHHHCCCEEEECCCCCCCHHHHHCCCCCCCCCHHHHHCCCCCEEEEEECCCCCCCCC
FPARDIFHVGGFSRDGVQGLNPVQYARDALGGAIATADHAARFWNKGGRPSTVLTSEKAI
CCCHHHHCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEECCCCC
GPTDKDRIKTDWTQMYSGPDADMVAVLDQDLKAEFLAHDLKSSQYLETRQFQVVDLARIW
CCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHC
GVPPHLIFDLSRATFGNIEQQSLEFVIYHLGPHYTRVAQAATKAFAKIGFYFEHVTAELV
CCCHHHHEECHHHHCCCCCHHCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KGDLKSRMEAYWLQRQMGMVNGNELRSYENLPNIEGNAGTDYWMPANMQVAGASAAPGST
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCC
EDTSGDQS
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA