Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99081462

Identifier: 99081462

GI number: 99081462

Start: 1728295

End: 1728756

Strand: Reverse

Name: 99081462

Synonym: TM1040_1621

Alternate gene names: NA

Gene position: 1728756-1728295 (Counterclockwise)

Preceding gene: 99081463

Following gene: 99081461

Centisome position: 54.01

GC content: 64.07

Gene sequence:

>462_bases
ATGACCACACAATTTCGAAATATCGGCGCGCTGATTTCGGTTATGCGCGCCACCGCCAACGTCGCAGCGACGGCAGGCGG
GGCAGGCGACAACGTCGAAGTGGTGGGCGCCATCATTGATCGCGGCGAGATCGGTTTCCCGCAAAGCTGCGTACTCGCCA
TCCCGTTCTCTGCGACCCTCGCGGAGGGAGAGACGCTGTCGATTGCCTGCGAAATCGAGTCCAGCAACGACCCGAATCTC
AGCGGTGCCACAGCCGTGACCACTGCTGCGAGCGCCGTGGTTGCAACGGGCCCCTCCGGTGGTGGAGCCGTCACGGGCAC
CCTCGAGCTCGATGCAGCTATCATGGGGGCGGGGCGCTACGTTCGCGCGAACTTCACCCCCGATCTCAGTGCGGCCAATA
CTGACACGGCCGCGTTGTCATCCGTCCTCGTATTCGGCGGTGCGGACCGCTTGCCAGCATGA

Upstream 100 bases:

>100_bases
CGTCCTTACGGGCGTCACTTGGGCACCCGGCCTCTGATCCTGAGCCGGTGGGCCCAGTCGGGCCCGCCATTACCCTTCGG
TCATACTGAGGAGACATGTC

Downstream 100 bases:

>100_bases
AGTCTGTCGAGTTTCTGAAATCCTATCGCATGTATCAACCAGGCGAAATCGCCGGATTCGATGATGCGTTGGCGGACAAG
TTGATCGCGGGTGGTGTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 152

Protein sequence:

>153_residues
MTTQFRNIGALISVMRATANVAATAGGAGDNVEVVGAIIDRGEIGFPQSCVLAIPFSATLAEGETLSIACEIESSNDPNL
SGATAVTTAASAVVATGPSGGGAVTGTLELDAAIMGAGRYVRANFTPDLSAANTDTAALSSVLVFGGADRLPA

Sequences:

>Translated_153_residues
MTTQFRNIGALISVMRATANVAATAGGAGDNVEVVGAIIDRGEIGFPQSCVLAIPFSATLAEGETLSIACEIESSNDPNL
SGATAVTTAASAVVATGPSGGGAVTGTLELDAAIMGAGRYVRANFTPDLSAANTDTAALSSVLVFGGADRLPA
>Mature_152_residues
TTQFRNIGALISVMRATANVAATAGGAGDNVEVVGAIIDRGEIGFPQSCVLAIPFSATLAEGETLSIACEIESSNDPNLS
GATAVTTAASAVVATGPSGGGAVTGTLELDAAIMGAGRYVRANFTPDLSAANTDTAALSSVLVFGGADRLPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15003; Mature: 14872

Theoretical pI: Translated: 3.91; Mature: 3.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTQFRNIGALISVMRATANVAATAGGAGDNVEVVGAIIDRGEIGFPQSCVLAIPFSATL
CCCCHHHHHHHHHHHHHHHCEEEECCCCCCCEEEEEEEECCCCCCCCCCEEEEECCCCEE
AEGETLSIACEIESSNDPNLSGATAVTTAASAVVATGPSGGGAVTGTLELDAAIMGAGRY
CCCCEEEEEEEEECCCCCCCCCCHHHHHHCCEEEEECCCCCCEEEEEEEECEEEECCCEE
VRANFTPDLSAANTDTAALSSVLVFGGADRLPA
EEEECCCCCCCCCCCHHHHHHEEEECCCCCCCC
>Mature Secondary Structure 
TTQFRNIGALISVMRATANVAATAGGAGDNVEVVGAIIDRGEIGFPQSCVLAIPFSATL
CCCHHHHHHHHHHHHHHHCEEEECCCCCCCEEEEEEEECCCCCCCCCCEEEEECCCCEE
AEGETLSIACEIESSNDPNLSGATAVTTAASAVVATGPSGGGAVTGTLELDAAIMGAGRY
CCCCEEEEEEEEECCCCCCCCCCHHHHHHCCEEEEECCCCCCEEEEEEEECEEEECCCEE
VRANFTPDLSAANTDTAALSSVLVFGGADRLPA
EEEECCCCCCCCCCCHHHHHHEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA