Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99081461

Identifier: 99081461

GI number: 99081461

Start: 1727837

End: 1728298

Strand: Reverse

Name: 99081461

Synonym: TM1040_1620

Alternate gene names: NA

Gene position: 1728298-1727837 (Counterclockwise)

Preceding gene: 99081462

Following gene: 99081460

Centisome position: 53.99

GC content: 57.58

Gene sequence:

>462_bases
ATGAAGTCTGTCGAGTTTCTGAAATCCTATCGCATGTATCAACCAGGCGAAATCGCCGGATTCGATGATGCGTTGGCGGA
CAAGTTGATCGCGGGTGGTGTTGCTGTTCTTCCTGGCGCTAAACGTGCCTTGAAGACCGAAACCGCCGATGAGCTGGGGC
GCCCGGTGGATCGCGACGATGCCGTTGTCGATGTTGCATCTGGCACAGAGGCTGGGAATGGGTCGGGCATCGATCTCAGT
ACGGTGGTGATTGAAACGGGAAGCGGCGATCAGTCGTCACCCGCAGCCTTTGAGACCGTCACCGGAGATCCTGGCGCAGC
GGATGCTGCCGATGCGTCTGGTTCGGATGACGCCACATCAACCGACACCGTTGGGGCCTCAGGGGGTTCTGCCAAACCCA
GCAAATCTGCGTCAGGGTCCTCATCGGATACCACCAAGAAATCCACTGCAAAAAAGGCCTGA

Upstream 100 bases:

>100_bases
ACGTTCGCGCGAACTTCACCCCCGATCTCAGTGCGGCCAATACTGACACGGCCGCGTTGTCATCCGTCCTCGTATTCGGC
GGTGCGGACCGCTTGCCAGC

Downstream 100 bases:

>100_bases
CGAATGCGTCTGACCCTTACCACGCCAGCGGCTGATCTTCCTGTGTCGCTCGAGGAGGCAAAAAGGCACTGCCGTGTCGA
GGCGGATGACACCGAAGATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MKSVEFLKSYRMYQPGEIAGFDDALADKLIAGGVAVLPGAKRALKTETADELGRPVDRDDAVVDVASGTEAGNGSGIDLS
TVVIETGSGDQSSPAAFETVTGDPGAADAADASGSDDATSTDTVGASGGSAKPSKSASGSSSDTTKKSTAKKA

Sequences:

>Translated_153_residues
MKSVEFLKSYRMYQPGEIAGFDDALADKLIAGGVAVLPGAKRALKTETADELGRPVDRDDAVVDVASGTEAGNGSGIDLS
TVVIETGSGDQSSPAAFETVTGDPGAADAADASGSDDATSTDTVGASGGSAKPSKSASGSSSDTTKKSTAKKA
>Mature_153_residues
MKSVEFLKSYRMYQPGEIAGFDDALADKLIAGGVAVLPGAKRALKTETADELGRPVDRDDAVVDVASGTEAGNGSGIDLS
TVVIETGSGDQSSPAAFETVTGDPGAADAADASGSDDATSTDTVGASGGSAKPSKSASGSSSDTTKKSTAKKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15077; Mature: 15077

Theoretical pI: Translated: 4.20; Mature: 4.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSVEFLKSYRMYQPGEIAGFDDALADKLIAGGVAVLPGAKRALKTETADELGRPVDRDD
CCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCEEECCCCHHHHHHCCHHHHCCCCCCCC
AVVDVASGTEAGNGSGIDLSTVVIETGSGDQSSPAAFETVTGDPGAADAADASGSDDATS
CEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCC
TDTVGASGGSAKPSKSASGSSSDTTKKSTAKKA
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCC
>Mature Secondary Structure
MKSVEFLKSYRMYQPGEIAGFDDALADKLIAGGVAVLPGAKRALKTETADELGRPVDRDD
CCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCEEECCCCHHHHHHCCHHHHCCCCCCCC
AVVDVASGTEAGNGSGIDLSTVVIETGSGDQSSPAAFETVTGDPGAADAADASGSDDATS
CEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCC
TDTVGASGGSAKPSKSASGSSSDTTKKSTAKKA
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA