Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99081434

Identifier: 99081434

GI number: 99081434

Start: 1703743

End: 1704630

Strand: Reverse

Name: 99081434

Synonym: TM1040_1593

Alternate gene names: NA

Gene position: 1704630-1703743 (Counterclockwise)

Preceding gene: 99081435

Following gene: 99081433

Centisome position: 53.25

GC content: 60.59

Gene sequence:

>888_bases
ATGATCGGAGAGGGGCTGGCGATACTGGCCGCGCTGTCCTACGGCGGCGCGGCTGTATCGATTGTGCAAAGCAAACCCGG
AGCGCAGGCAGACAACGGCGTCTTCCTGTCGGTGCTGGTGCTGTTTGGGATCTCCGGCGGGATTTGGCTCGGCAGTGGCG
TTGTGCCGCTCTCGGCGCTTTGGCAGCCAGAAGGGCTCTGCGCTATTGGGGTCTTTGCTCTTGCGGGGCTGAGCGCAAAC
GGTCTGGCGCGATGGTCGATGTATCGCGCGACCGAGCGGATTGGTGCCGTTTCCGCAACTCTGCTACGCCGTCTCACCCC
CATCTTTGTACTGCCGTTTGCCTATCTGCTCCTCGAGCAAATTCCTGATGTGGCAACGCTTTGGGGCGGCTGTGTCATCC
TGATCGGGGTCTGGATCTACCTGCGTCCGAGCACACAACCGGCTGCGGGAGGCCTGTCATCCGGGGTGATGTTGGGGCTA
CTTTCGCCGTTGGCCTATGCCTTTGCCTATAGCTTGCGCGGGCTGGGATTGAACGGACTGCCAGACCCGGCGCTTGGCAC
CTTTGTTGGTGCAGGAGCCGCGATCATCTGGAGTTTGGCGCGCCACGGTCTGCACCGGTCGCCAGAGCGGGGGCTGAGGT
ATCTGCTGACGGATCGCAGTCCCGCGCATTGGCGTACGGCTCTGGCCCTGAGTGTCGGACAACTCCTACAGTTCTTTGCC
CTAAAGATAAGCGCTGTGGCGACCGTGGCCCTCCTTGGGACTTTGGAAGTGCTATTCTCTGCCGTCTTTATATGGCTCAT
CTATGGGCGCGAGAGTGTTGATATTAAGCGCTTATTTGCTGCTACCCTTTGTGCGCTCGGCGGGACTGCCCTGATGATAT
TGGCCTGA

Upstream 100 bases:

>100_bases
GGGACGTGTGCGTCATCCGATGCTGGAGCTCACCGAGGCCGAGAAAGCCGCCACCAGTGCCGCCTTTGAGGATTGTGGCC
TCCTGCGTTGATCCCGCATC

Downstream 100 bases:

>100_bases
GATCGGTATCAGCAATCTGGATACCCACTTTCGCGGAAATAAATATTTCGCATGGGCAATATTTCCTAGGGTAGCGATAA
GCGCAACCCAACGCCCCCAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MIGEGLAILAALSYGGAAVSIVQSKPGAQADNGVFLSVLVLFGISGGIWLGSGVVPLSALWQPEGLCAIGVFALAGLSAN
GLARWSMYRATERIGAVSATLLRRLTPIFVLPFAYLLLEQIPDVATLWGGCVILIGVWIYLRPSTQPAAGGLSSGVMLGL
LSPLAYAFAYSLRGLGLNGLPDPALGTFVGAGAAIIWSLARHGLHRSPERGLRYLLTDRSPAHWRTALALSVGQLLQFFA
LKISAVATVALLGTLEVLFSAVFIWLIYGRESVDIKRLFAATLCALGGTALMILA

Sequences:

>Translated_295_residues
MIGEGLAILAALSYGGAAVSIVQSKPGAQADNGVFLSVLVLFGISGGIWLGSGVVPLSALWQPEGLCAIGVFALAGLSAN
GLARWSMYRATERIGAVSATLLRRLTPIFVLPFAYLLLEQIPDVATLWGGCVILIGVWIYLRPSTQPAAGGLSSGVMLGL
LSPLAYAFAYSLRGLGLNGLPDPALGTFVGAGAAIIWSLARHGLHRSPERGLRYLLTDRSPAHWRTALALSVGQLLQFFA
LKISAVATVALLGTLEVLFSAVFIWLIYGRESVDIKRLFAATLCALGGTALMILA
>Mature_295_residues
MIGEGLAILAALSYGGAAVSIVQSKPGAQADNGVFLSVLVLFGISGGIWLGSGVVPLSALWQPEGLCAIGVFALAGLSAN
GLARWSMYRATERIGAVSATLLRRLTPIFVLPFAYLLLEQIPDVATLWGGCVILIGVWIYLRPSTQPAAGGLSSGVMLGL
LSPLAYAFAYSLRGLGLNGLPDPALGTFVGAGAAIIWSLARHGLHRSPERGLRYLLTDRSPAHWRTALALSVGQLLQFFA
LKISAVATVALLGTLEVLFSAVFIWLIYGRESVDIKRLFAATLCALGGTALMILA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30860; Mature: 30860

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGEGLAILAALSYGGAAVSIVQSKPGAQADNGVFLSVLVLFGISGGIWLGSGVVPLSAL
CCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCHHHH
WQPEGLCAIGVFALAGLSANGLARWSMYRATERIGAVSATLLRRLTPIFVLPFAYLLLEQ
CCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IPDVATLWGGCVILIGVWIYLRPSTQPAAGGLSSGVMLGLLSPLAYAFAYSLRGLGLNGL
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDPALGTFVGAGAAIIWSLARHGLHRSPERGLRYLLTDRSPAHWRTALALSVGQLLQFFA
CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHH
LKISAVATVALLGTLEVLFSAVFIWLIYGRESVDIKRLFAATLCALGGTALMILA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEC
>Mature Secondary Structure
MIGEGLAILAALSYGGAAVSIVQSKPGAQADNGVFLSVLVLFGISGGIWLGSGVVPLSAL
CCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCHHHH
WQPEGLCAIGVFALAGLSANGLARWSMYRATERIGAVSATLLRRLTPIFVLPFAYLLLEQ
CCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IPDVATLWGGCVILIGVWIYLRPSTQPAAGGLSSGVMLGLLSPLAYAFAYSLRGLGLNGL
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDPALGTFVGAGAAIIWSLARHGLHRSPERGLRYLLTDRSPAHWRTALALSVGQLLQFFA
CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHH
LKISAVATVALLGTLEVLFSAVFIWLIYGRESVDIKRLFAATLCALGGTALMILA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA