Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is yoaT [H]

Identifier: 99081425

GI number: 99081425

Start: 1692970

End: 1693896

Strand: Direct

Name: yoaT [H]

Synonym: TM1040_1584

Alternate gene names: 99081425

Gene position: 1692970-1693896 (Clockwise)

Preceding gene: 99081421

Following gene: 99081427

Centisome position: 52.89

GC content: 59.76

Gene sequence:

>927_bases
ATGACTGAACCTGCCCAAAATCCAATCCCCATGAATCGCACGCGCCGTCTTGAACGCGCCCTTGGCGACTGGTGCCGCGC
GCGCCTGCCACATTACCTGTCTGAACTGGTGATGTTCACGCTCAAACAAGGTTGGGCGGCAATCTTCGGGATCTTGCTCC
TGGGCGGGCTCTTGGTCTCCAGCCGCATCTGGCAGGCAGATTGGGCGCTGGCGCGCTATGATGCGCTGCTGATCTATGCG
CTCGGGCTGCAGGCAGTGTTCCTGATCACCGGCATGGAAAGCACCCGCGAAGCGCGGGTGATCTTGTTGTTTCATCTCAC
CGGCACGATCATGGAAATCTTCAAGGTTCAGGCCGGAAGCTGGGCCTATCCGGGCGCGGGCGTCCTGAAGCTCTGGGGCG
TTCCGCTGTTTTCGGGTTTTATGTATGCGTCAGTAGGGTCTTACATGGCGCGGGTCATCCGGCTGTTTGACATGCGTTTT
GCGCCCTACCCGCCGACATGGATGGCAAGCTGCCTCGCGGTCCTGATCTATGTGAATTTCTTCAGCCACCACTTCCTGCC
CGACATACGGCTCGCGCTCTTTGTTGCAACGGTGGTGATCTTTATCCGCACCCGCATCTGGTTTTACATCGGCGGCCATG
CCTATTGGATGCCCTTGCCGCTAGCGGCCTTCCTGTCGAGTTTTTTCCTCTGGGTGGCCGAGAACGTGGGCACGCGTACG
CGAACCTGGCTCTATGCGGGACAGGACAGCGACCACTGGGTCAGCTTGGCCAAGATGGGCAGCTGGTACCTGCTGCTCTA
TGTGAGCTTTGTCACCGTGACCCTCGTGGTGCGCGATGCACTGTCGGCAGAGGCCTTCCGGCCGTCTGGCCCATCCGGGA
TCAGACGAAACCCCGCCAGCGCAGCACAACCACCATCAGCACAATAA

Upstream 100 bases:

>100_bases
ATAGGCTGCCGCAGTCCGGGAATGCAAATCCTCGCCGTGCGGTGACTGATCTTGGAGTTTCGCGTGGACTTGATGAGACT
TTTCCCGTCATTTCTCGGTC

Downstream 100 bases:

>100_bases
CACAGAGGATCGCAAAGGCAGAGGTCGCAGCCATGTCCAAAAGCCGCCCCTTGCGCCGGTCCTTGAGGTCGAGCTCTGTC
AGATAAGCCCTGAGACGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MTEPAQNPIPMNRTRRLERALGDWCRARLPHYLSELVMFTLKQGWAAIFGILLLGGLLVSSRIWQADWALARYDALLIYA
LGLQAVFLITGMESTREARVILLFHLTGTIMEIFKVQAGSWAYPGAGVLKLWGVPLFSGFMYASVGSYMARVIRLFDMRF
APYPPTWMASCLAVLIYVNFFSHHFLPDIRLALFVATVVIFIRTRIWFYIGGHAYWMPLPLAAFLSSFFLWVAENVGTRT
RTWLYAGQDSDHWVSLAKMGSWYLLLYVSFVTVTLVVRDALSAEAFRPSGPSGIRRNPASAAQPPSAQ

Sequences:

>Translated_308_residues
MTEPAQNPIPMNRTRRLERALGDWCRARLPHYLSELVMFTLKQGWAAIFGILLLGGLLVSSRIWQADWALARYDALLIYA
LGLQAVFLITGMESTREARVILLFHLTGTIMEIFKVQAGSWAYPGAGVLKLWGVPLFSGFMYASVGSYMARVIRLFDMRF
APYPPTWMASCLAVLIYVNFFSHHFLPDIRLALFVATVVIFIRTRIWFYIGGHAYWMPLPLAAFLSSFFLWVAENVGTRT
RTWLYAGQDSDHWVSLAKMGSWYLLLYVSFVTVTLVVRDALSAEAFRPSGPSGIRRNPASAAQPPSAQ
>Mature_307_residues
TEPAQNPIPMNRTRRLERALGDWCRARLPHYLSELVMFTLKQGWAAIFGILLLGGLLVSSRIWQADWALARYDALLIYAL
GLQAVFLITGMESTREARVILLFHLTGTIMEIFKVQAGSWAYPGAGVLKLWGVPLFSGFMYASVGSYMARVIRLFDMRFA
PYPPTWMASCLAVLIYVNFFSHHFLPDIRLALFVATVVIFIRTRIWFYIGGHAYWMPLPLAAFLSSFFLWVAENVGTRTR
TWLYAGQDSDHWVSLAKMGSWYLLLYVSFVTVTLVVRDALSAEAFRPSGPSGIRRNPASAAQPPSAQ

Specific function: Unknown

COG id: COG3739

COG function: function code S; Uncharacterized integral membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008535 [H]

Pfam domain/function: PF05675 DUF817 [H]

EC number: NA

Molecular weight: Translated: 34787; Mature: 34656

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEPAQNPIPMNRTRRLERALGDWCRARLPHYLSELVMFTLKQGWAAIFGILLLGGLLVS
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRIWQADWALARYDALLIYALGLQAVFLITGMESTREARVILLFHLTGTIMEIFKVQAGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHHCCCC
WAYPGAGVLKLWGVPLFSGFMYASVGSYMARVIRLFDMRFAPYPPTWMASCLAVLIYVNF
CCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
FSHHFLPDIRLALFVATVVIFIRTRIWFYIGGHAYWMPLPLAAFLSSFFLWVAENVGTRT
HHHHCCHHHHHHHHHHHHHHHHHHHHHEEECCEEEEHHHHHHHHHHHHHHHHHHCCCCCE
RTWLYAGQDSDHWVSLAKMGSWYLLLYVSFVTVTLVVRDALSAEAFRPSGPSGIRRNPAS
EEEEEECCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
AAQPPSAQ
CCCCCCCC
>Mature Secondary Structure 
TEPAQNPIPMNRTRRLERALGDWCRARLPHYLSELVMFTLKQGWAAIFGILLLGGLLVS
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRIWQADWALARYDALLIYALGLQAVFLITGMESTREARVILLFHLTGTIMEIFKVQAGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHHCCCC
WAYPGAGVLKLWGVPLFSGFMYASVGSYMARVIRLFDMRFAPYPPTWMASCLAVLIYVNF
CCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
FSHHFLPDIRLALFVATVVIFIRTRIWFYIGGHAYWMPLPLAAFLSSFFLWVAENVGTRT
HHHHCCHHHHHHHHHHHHHHHHHHHHHEEECCEEEEHHHHHHHHHHHHHHHHHHCCCCCE
RTWLYAGQDSDHWVSLAKMGSWYLLLYVSFVTVTLVVRDALSAEAFRPSGPSGIRRNPAS
EEEEEECCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
AAQPPSAQ
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]