Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is blh [H]

Identifier: 99081346

GI number: 99081346

Start: 1610302

End: 1610730

Strand: Direct

Name: blh [H]

Synonym: TM1040_1505

Alternate gene names: 99081346

Gene position: 1610302-1610730 (Clockwise)

Preceding gene: 99081344

Following gene: 99081352

Centisome position: 50.31

GC content: 59.44

Gene sequence:

>429_bases
ATGGATGCACGCACATTGACCCCCCGCTACTCGGTTTCTCCGCAGATCTCCGTGGAGGATATTCCCGCAATCAAAGCCGC
CGGTTTTACAACGGTGATCTGCAACAGACCTGATGCAGAAGTCCCGCCCAGCCATCAGGCCGAGGCGATCCGCGCAGCCG
TCGAAGACGCCGGGTTGTCTTTTCAGGTCCTGCCGCTCACCCACCAGACGATGACGCCGGAAAACGTTGAAAAACAAGGC
GCTTTTGTCCAAAGTTCAGAAGGTCCGGTGCTGGCGTATTGCGCCTCGGGCACGCGGTGTTCCGTGATCTGGGCGCTGGG
TCAGGTGGCCAATCCAGAGATTTCGGTGGATGACATCATGTCGACCACGCAGGAGGCTGGGTATGATCTTTCGGGCCTGC
GCCCCACGCTTGAGGCCCTTAAGGGGTAG

Upstream 100 bases:

>100_bases
GTGTATTCCGGTCCTGCAGGACCAAAACCCCTGCCCGAGATCGAACCTGTACGGCGCTTCGATCTAGACCAATGCGGGAC
AAAGGCGTAAACGATACCGC

Downstream 100 bases:

>100_bases
TCTCCGCCACGGATTCCCGAGCGCGGATCTCCGGGCGATTGTCCCGGCATCACGCGAAGGAAACGCCCTGACGAAGATCA
GTCGCAATGACGGCCCGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MDARTLTPRYSVSPQISVEDIPAIKAAGFTTVICNRPDAEVPPSHQAEAIRAAVEDAGLSFQVLPLTHQTMTPENVEKQG
AFVQSSEGPVLAYCASGTRCSVIWALGQVANPEISVDDIMSTTQEAGYDLSGLRPTLEALKG

Sequences:

>Translated_142_residues
MDARTLTPRYSVSPQISVEDIPAIKAAGFTTVICNRPDAEVPPSHQAEAIRAAVEDAGLSFQVLPLTHQTMTPENVEKQG
AFVQSSEGPVLAYCASGTRCSVIWALGQVANPEISVDDIMSTTQEAGYDLSGLRPTLEALKG
>Mature_142_residues
MDARTLTPRYSVSPQISVEDIPAIKAAGFTTVICNRPDAEVPPSHQAEAIRAAVEDAGLSFQVLPLTHQTMTPENVEKQG
AFVQSSEGPVLAYCASGTRCSVIWALGQVANPEISVDDIMSTTQEAGYDLSGLRPTLEALKG

Specific function: Unknown

COG id: COG3453

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-B beta-lactamase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005939
- InterPro:   IPR001279 [H]

Pfam domain/function: PF04273 DUF442; PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 15072; Mature: 15072

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDARTLTPRYSVSPQISVEDIPAIKAAGFTTVICNRPDAEVPPSHQAEAIRAAVEDAGLS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCE
FQVLPLTHQTMTPENVEKQGAFVQSSEGPVLAYCASGTRCSVIWALGQVANPEISVDDIM
EEEEECCCCCCCCCCHHHCCCEEECCCCCEEEEECCCCEEEEEEEECCCCCCCCCHHHHH
STTQEAGYDLSGLRPTLEALKG
HHHHHCCCCCCCCCHHHHHHCC
>Mature Secondary Structure
MDARTLTPRYSVSPQISVEDIPAIKAAGFTTVICNRPDAEVPPSHQAEAIRAAVEDAGLS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCE
FQVLPLTHQTMTPENVEKQGAFVQSSEGPVLAYCASGTRCSVIWALGQVANPEISVDDIM
EEEEECCCCCCCCCCHHHCCCEEECCCCCEEEEECCCCEEEEEEEECCCCCCCCCHHHHH
STTQEAGYDLSGLRPTLEALKG
HHHHHCCCCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11743193; 11743194 [H]