Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99081297

Identifier: 99081297

GI number: 99081297

Start: 1554609

End: 1555856

Strand: Reverse

Name: 99081297

Synonym: TM1040_1456

Alternate gene names: NA

Gene position: 1555856-1554609 (Counterclockwise)

Preceding gene: 99081298

Following gene: 99081296

Centisome position: 48.61

GC content: 60.5

Gene sequence:

>1248_bases
ATGAGCAGCACATCCAGCGCAGGTCCGGTGCAGAGACGCCGGGTGTTTTACATACCGGGGTATGACCCGTTCCACCCGCG
CCGTTACCGCGAGCTATATCGCAGCGAAGGGGCGGAGCAGGCCGAGATTTCGGGCTACGATCTGACACTGCGCCCGAAAT
CCTCGCCGGGACCATTCGGTTGGCATGTGAGCGCCTCTATCGAGGGGGCCGATGTCGAGACCGACATCGAGGTTCTGGTC
TGGTCCGACATCGTCAAGCACAGCATGCGCAGCACAGTCGCGGCGACCTATTGGCAGCTTTTGCGAACTGTTTGGATCTA
TGTGGCCACGGGGACATTGTGGCGTCTGATGCGCCTGCGAAAAGGACCGGTGATTGCCGCACTTTACCCGGTGGCCATTC
TCTTGGTGCAGGCCTTCCTTGCGCTCCTGGCAGGCTATGCGTTCGCCCGATTAACCGGGGTGATTGGCGCGTGGTTCTCC
CTGCCTGATCTGGTTGCGATCTTCCTGCAAGGGTCGGTTGGGGCTGGGGCGGCTGTGATGTTGCTGAGGCTGTTCAAGGC
GCATGACAACAAGCTCTTTGTATATTACCTCATGCATGATTATGCTTATTCTGCAGGGCTTTGTGGCGCGATCCCTGCCG
AGCTCGAGGCGCGGATGAAGGCGTTTACAGCCACTGTTCGCGATGCGCTCACTGAAAACACCGTGGATGAGGTTCTGGTG
GTCGGGCATTCCTCCGGCGCCCACATCGGGGTTTCTGTGCTGGCTGATCTCTTGCAGGAGGACCTGCCAGAACAGCGTCC
CGTGCTCAGTCTCCTGACATTGGGGCAAGTGGTGCCAATGGTGTCGTTCCTGCCGCGCGCCACGCGTCTGCGACGTGATC
TGCGCGAGATTTCTGAGCAGCAGAGCATCGCATGGTATGACGTGACCGCACCCGGCGACGGCTGCGCGTTTGCGCTCTGT
GATCCGGTGGCGGTCAGCGGCGTTGCACCACCTGAGCAGCGCTGGCCCATCGTCTTTTCTGCGGCGTTTACCAAGACCCT
CAGCCCCGCCCGCTGGCAGGCGCTGAAGCGGCGGTACTTCCGCCTTCATTTTCAGTATCTTTGCGCGTTTGATCAGCCCA
AGCACTATGACTATTTTCGGATCACGGCTGGCCCATTGACGCTCGGCGCGCGGCTGAAGGCGCGCGGTCATTCTCGCTCT
CGTCTGGCAAAGCCGTTGAGCCGCTACCGGGATATGGACAAGCGATGA

Upstream 100 bases:

>100_bases
CGCCACCCCGCCGCCCACGCGGGGTGCACGCACCATCTTACACTGCGCAGCAAGCTGAGTTAGGCTTGGGCGCATAAAGA
TCGGGGCGACAAGATCACGC

Downstream 100 bases:

>100_bases
CCCTGCGCCCGCCAAAACCCCCGGTACGGCCTGACAGAGTCTCGCTCTGGCGCTACCTGAAGCTGTTTCGGGCCGATATT
CTGTCGGCGCAGCCGCAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 415; Mature: 414

Protein sequence:

>415_residues
MSSTSSAGPVQRRRVFYIPGYDPFHPRRYRELYRSEGAEQAEISGYDLTLRPKSSPGPFGWHVSASIEGADVETDIEVLV
WSDIVKHSMRSTVAATYWQLLRTVWIYVATGTLWRLMRLRKGPVIAALYPVAILLVQAFLALLAGYAFARLTGVIGAWFS
LPDLVAIFLQGSVGAGAAVMLLRLFKAHDNKLFVYYLMHDYAYSAGLCGAIPAELEARMKAFTATVRDALTENTVDEVLV
VGHSSGAHIGVSVLADLLQEDLPEQRPVLSLLTLGQVVPMVSFLPRATRLRRDLREISEQQSIAWYDVTAPGDGCAFALC
DPVAVSGVAPPEQRWPIVFSAAFTKTLSPARWQALKRRYFRLHFQYLCAFDQPKHYDYFRITAGPLTLGARLKARGHSRS
RLAKPLSRYRDMDKR

Sequences:

>Translated_415_residues
MSSTSSAGPVQRRRVFYIPGYDPFHPRRYRELYRSEGAEQAEISGYDLTLRPKSSPGPFGWHVSASIEGADVETDIEVLV
WSDIVKHSMRSTVAATYWQLLRTVWIYVATGTLWRLMRLRKGPVIAALYPVAILLVQAFLALLAGYAFARLTGVIGAWFS
LPDLVAIFLQGSVGAGAAVMLLRLFKAHDNKLFVYYLMHDYAYSAGLCGAIPAELEARMKAFTATVRDALTENTVDEVLV
VGHSSGAHIGVSVLADLLQEDLPEQRPVLSLLTLGQVVPMVSFLPRATRLRRDLREISEQQSIAWYDVTAPGDGCAFALC
DPVAVSGVAPPEQRWPIVFSAAFTKTLSPARWQALKRRYFRLHFQYLCAFDQPKHYDYFRITAGPLTLGARLKARGHSRS
RLAKPLSRYRDMDKR
>Mature_414_residues
SSTSSAGPVQRRRVFYIPGYDPFHPRRYRELYRSEGAEQAEISGYDLTLRPKSSPGPFGWHVSASIEGADVETDIEVLVW
SDIVKHSMRSTVAATYWQLLRTVWIYVATGTLWRLMRLRKGPVIAALYPVAILLVQAFLALLAGYAFARLTGVIGAWFSL
PDLVAIFLQGSVGAGAAVMLLRLFKAHDNKLFVYYLMHDYAYSAGLCGAIPAELEARMKAFTATVRDALTENTVDEVLVV
GHSSGAHIGVSVLADLLQEDLPEQRPVLSLLTLGQVVPMVSFLPRATRLRRDLREISEQQSIAWYDVTAPGDGCAFALCD
PVAVSGVAPPEQRWPIVFSAAFTKTLSPARWQALKRRYFRLHFQYLCAFDQPKHYDYFRITAGPLTLGARLKARGHSRSR
LAKPLSRYRDMDKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46384; Mature: 46253

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: PS00120 LIPASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSTSSAGPVQRRRVFYIPGYDPFHPRRYRELYRSEGAEQAEISGYDLTLRPKSSPGPFG
CCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCC
WHVSASIEGADVETDIEVLVWSDIVKHSMRSTVAATYWQLLRTVWIYVATGTLWRLMRLR
EEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KGPVIAALYPVAILLVQAFLALLAGYAFARLTGVIGAWFSLPDLVAIFLQGSVGAGAAVM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
LLRLFKAHDNKLFVYYLMHDYAYSAGLCGAIPAELEARMKAFTATVRDALTENTVDEVLV
HHHHHHCCCCCEEEEEEEHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHEEE
VGHSSGAHIGVSVLADLLQEDLPEQRPVLSLLTLGQVVPMVSFLPRATRLRRDLREISEQ
EECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QSIAWYDVTAPGDGCAFALCDPVAVSGVAPPEQRWPIVFSAAFTKTLSPARWQALKRRYF
CCEEEEEEECCCCCCEEEEECCHHHCCCCCCCCCCCEEEEHHHHHCCCHHHHHHHHHHHH
RLHFQYLCAFDQPKHYDYFRITAGPLTLGARLKARGHSRSRLAKPLSRYRDMDKR
HHHHHHHHCCCCCCCCCEEEEECCCEEECCHHHCCCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SSTSSAGPVQRRRVFYIPGYDPFHPRRYRELYRSEGAEQAEISGYDLTLRPKSSPGPFG
CCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCC
WHVSASIEGADVETDIEVLVWSDIVKHSMRSTVAATYWQLLRTVWIYVATGTLWRLMRLR
EEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KGPVIAALYPVAILLVQAFLALLAGYAFARLTGVIGAWFSLPDLVAIFLQGSVGAGAAVM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
LLRLFKAHDNKLFVYYLMHDYAYSAGLCGAIPAELEARMKAFTATVRDALTENTVDEVLV
HHHHHHCCCCCEEEEEEEHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHEEE
VGHSSGAHIGVSVLADLLQEDLPEQRPVLSLLTLGQVVPMVSFLPRATRLRRDLREISEQ
EECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QSIAWYDVTAPGDGCAFALCDPVAVSGVAPPEQRWPIVFSAAFTKTLSPARWQALKRRYF
CCEEEEEEECCCCCCEEEEECCHHHCCCCCCCCCCCEEEEHHHHHCCCHHHHHHHHHHHH
RLHFQYLCAFDQPKHYDYFRITAGPLTLGARLKARGHSRSRLAKPLSRYRDMDKR
HHHHHHHHCCCCCCCCCEEEEECCCEEECCHHHCCCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA