| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99081289
Identifier: 99081289
GI number: 99081289
Start: 1546769
End: 1547203
Strand: Direct
Name: 99081289
Synonym: TM1040_1448
Alternate gene names: NA
Gene position: 1546769-1547203 (Clockwise)
Preceding gene: 99081288
Following gene: 99081290
Centisome position: 48.32
GC content: 58.16
Gene sequence:
>435_bases ATGAAAAACAGCGCCCTGCTGAAATACTGGTTCGAAGAAGTCTGGAACAAAGACAACCTCTCCGTCATCGACGAGCTTCT GGACCCGGATGTAACCTTCAATGGCGCGCTCGACGGCGTAGCAGCCCCCGGTGTGGACTACAAGGAAGTGGTCGGCGCGC TCAAGGCGCGGCTGGATCAGCCTTATGTGACCATCACCCACAGCATGGATGATGGCGATCTGGCGATGGTGCGCGTACAG GTACGTGCCCACGATCTGACCCGGACGCGCGAATTGGATTTCACCGGTCAGATGTGTGTCCGCGTGCGCGATGGCCGCTT TGTCGAGTTCTATTCGAACTTTGACTACTTGCGGATGTTCGAGCAGCTCGGCCAATTGCCCAGCGACGCCCTGCCGGTCT GCCTGACCGGAGAGAAGCTGACCTGGGTCGAATAA
Upstream 100 bases:
>100_bases GTAGGGTTGCGAAGTTACGGCGTTATGGCTCTCGACATTATGTGTAACTTCACTTAGGCGGCGCCTTTGGTAACTGTTAA GATGATGAAGCTTCTCTGAG
Downstream 100 bases:
>100_bases TCCAGACCAGATGACGGCCCATCCCGCCTGCTCGGCGGGTGGGCAAGGCTCTGGCTATCCTGTCAGGCTTTGATAGAAGG GGCGCAGGTGTAATCAACCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MKNSALLKYWFEEVWNKDNLSVIDELLDPDVTFNGALDGVAAPGVDYKEVVGALKARLDQPYVTITHSMDDGDLAMVRVQ VRAHDLTRTRELDFTGQMCVRVRDGRFVEFYSNFDYLRMFEQLGQLPSDALPVCLTGEKLTWVE
Sequences:
>Translated_144_residues MKNSALLKYWFEEVWNKDNLSVIDELLDPDVTFNGALDGVAAPGVDYKEVVGALKARLDQPYVTITHSMDDGDLAMVRVQ VRAHDLTRTRELDFTGQMCVRVRDGRFVEFYSNFDYLRMFEQLGQLPSDALPVCLTGEKLTWVE >Mature_144_residues MKNSALLKYWFEEVWNKDNLSVIDELLDPDVTFNGALDGVAAPGVDYKEVVGALKARLDQPYVTITHSMDDGDLAMVRVQ VRAHDLTRTRELDFTGQMCVRVRDGRFVEFYSNFDYLRMFEQLGQLPSDALPVCLTGEKLTWVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16453; Mature: 16453
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNSALLKYWFEEVWNKDNLSVIDELLDPDVTFNGALDGVAAPGVDYKEVVGALKARLDQ CCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHCCC PYVTITHSMDDGDLAMVRVQVRAHDLTRTRELDFTGQMCVRVRDGRFVEFYSNFDYLRMF CEEEEEECCCCCCEEEEEEEEEHHCCCHHCCCCCCCEEEEEECCCCEEEEECCCHHHHHH EQLGQLPSDALPVCLTGEKLTWVE HHHCCCCCCCCCEEEECCEEEECC >Mature Secondary Structure MKNSALLKYWFEEVWNKDNLSVIDELLDPDVTFNGALDGVAAPGVDYKEVVGALKARLDQ CCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHCCC PYVTITHSMDDGDLAMVRVQVRAHDLTRTRELDFTGQMCVRVRDGRFVEFYSNFDYLRMF CEEEEEECCCCCCEEEEEEEEEHHCCCHHCCCCCCCEEEEEECCCCEEEEECCCHHHHHH EQLGQLPSDALPVCLTGEKLTWVE HHHCCCCCCCCCEEEECCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA