| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is mhpC [C]
Identifier: 99081221
GI number: 99081221
Start: 1474186
End: 1475151
Strand: Direct
Name: mhpC [C]
Synonym: TM1040_1380
Alternate gene names: 99081221
Gene position: 1474186-1475151 (Clockwise)
Preceding gene: 99081220
Following gene: 99081222
Centisome position: 46.05
GC content: 62.73
Gene sequence:
>966_bases ATGAGTGCCATCCTTGCTCTTGCCGTGACGCTTGGCTTTGCTGGGGTTGCGGGCTTTACCGCCCTGCGCGCCCCACTGCG CGAGGCCGAGAGTATCGCCAATCATCCGCCTCAAGGACAGTTCCTGAACGTGGACGGCCATCAGATCCATGTGGTCGAGC GCGGCCAGCCGCAAGGCAGCGCCCCTGATCTGGTGCTGATTCATGGGTCCAACGGCAGCATCCGGGACATGACGTTCCGA CTGTCGCCCGCGCTCGAAGAGGCCTATCGCATCTTGATCTTTGATCGACCTGGGCTTGGCTATTCCGATGCAATCTCCGC TGATGGGACCAGCATCCAAACCCAGGCGGCCATTTTGCAAAAAGCCAGCGCGCGCCTCGGCGCACAGCGCCCGATCGTGC TGGGCCAAAGCTACGGGGGCGCCGTGGCGCTCGCCTGGGCGACGGAGTTTCCGCAGCATACCGCAGCCGTTGTCAGCGTT TCTGGTGTATCGCACCCTTGGGACGCGGAACTACCGACCTTTTACAAACTGACCTCGTCGCGCTTTGGCAGCGCGGTCAT CGTCCCGCTGCTCACCGCCTTTGTGCCCAAGAGCTATGTACGCGACTCGCTCAAGGACGTCTTTGCCCCGCAGGCGGTGC CCGACGGGTTTGCAGATCATTTTGGGCTCGCCATGAGCCTGCGCCGCAGTTCCTTGCGGGCCAATGCCAAGCAGCGCGCC AATCTTCTGACCGAGGTCGAGGCGATGGCGCCAAAGTATCCTGACCTCAGCATGCCCATCGAAGTGGTGCACGGCACCGC CGACACCACCGTGGGCATATCAATTCATGCCGAGCGCCTTGTTGCGGACAGCCGGACCGCGCGTCTCACGCCGTTGCCGG ATGTTGGACATATGCCGCATCAGACCCACACGCAGGAGGTGGTGGCAGCGGTCCATCGAGCGGCAACGCGGGCAAACTTG CGTTAA
Upstream 100 bases:
>100_bases GCTCTATGGCAACTGGGTGTCTGAAATCTATCAGACGACCCCATATGATGTGGAGCGCATCGGTCTCGACACGACGGACC TTCGGGCCTGATCTTTGCGG
Downstream 100 bases:
>100_bases TCGCTTTAACATTGAACAGTGACAGGGCAAGTGTGGGCGGGCGAGAAAGGACAGGGTGGAAATGACTTTGCCATTTGACG GCGCAATCAGCCAGTATTTC
Product: alpha/beta hydrolase fold
Products: 2-oxopent-4-enoate; succinate [C]
Alternate protein names: Alpha/Beta Hydrolase; Alpha/Beta Hydrolase Fold Protein; Esterase; Alpha/Beta Hydrolase Fold-Containing Protein; Lactone-Specific Esterase; Alpha/Beta Fold Family Hydrolase; Hydrolase Alpha/Beta Fold Family; Hydrolase Or Acyltransferase; Hydrolase Alpha/Beta Fold Family Protein; Esterase/Hydrolase; Lactone-Specific Esterase Protein; Family; Alpha/Beta Fold Superfamily Hydrolase; Esterase/Hydrolase Protein; Esterase Protein; 2-Hydroxy-6-Oxo-6-Phenylhexa-2 4-Dienoate Hydrolase; Hydrolase; Lactone Esterase
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MSAILALAVTLGFAGVAGFTALRAPLREAESIANHPPQGQFLNVDGHQIHVVERGQPQGSAPDLVLIHGSNGSIRDMTFR LSPALEEAYRILIFDRPGLGYSDAISADGTSIQTQAAILQKASARLGAQRPIVLGQSYGGAVALAWATEFPQHTAAVVSV SGVSHPWDAELPTFYKLTSSRFGSAVIVPLLTAFVPKSYVRDSLKDVFAPQAVPDGFADHFGLAMSLRRSSLRANAKQRA NLLTEVEAMAPKYPDLSMPIEVVHGTADTTVGISIHAERLVADSRTARLTPLPDVGHMPHQTHTQEVVAAVHRAATRANL R
Sequences:
>Translated_321_residues MSAILALAVTLGFAGVAGFTALRAPLREAESIANHPPQGQFLNVDGHQIHVVERGQPQGSAPDLVLIHGSNGSIRDMTFR LSPALEEAYRILIFDRPGLGYSDAISADGTSIQTQAAILQKASARLGAQRPIVLGQSYGGAVALAWATEFPQHTAAVVSV SGVSHPWDAELPTFYKLTSSRFGSAVIVPLLTAFVPKSYVRDSLKDVFAPQAVPDGFADHFGLAMSLRRSSLRANAKQRA NLLTEVEAMAPKYPDLSMPIEVVHGTADTTVGISIHAERLVADSRTARLTPLPDVGHMPHQTHTQEVVAAVHRAATRANL R >Mature_320_residues SAILALAVTLGFAGVAGFTALRAPLREAESIANHPPQGQFLNVDGHQIHVVERGQPQGSAPDLVLIHGSNGSIRDMTFRL SPALEEAYRILIFDRPGLGYSDAISADGTSIQTQAAILQKASARLGAQRPIVLGQSYGGAVALAWATEFPQHTAAVVSVS GVSHPWDAELPTFYKLTSSRFGSAVIVPLLTAFVPKSYVRDSLKDVFAPQAVPDGFADHFGLAMSLRRSSLRANAKQRAN LLTEVEAMAPKYPDLSMPIEVVHGTADTTVGISIHAERLVADSRTARLTPLPDVGHMPHQTHTQEVVAAVHRAATRANLR
Specific function: 3-hydroxyphenylpropionate degradation. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.7.1.- [C]
Molecular weight: Translated: 34238; Mature: 34107
Theoretical pI: Translated: 8.11; Mature: 8.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAILALAVTLGFAGVAGFTALRAPLREAESIANHPPQGQFLNVDGHQIHVVERGQPQGS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCEEEEEECCCCCCC APDLVLIHGSNGSIRDMTFRLSPALEEAYRILIFDRPGLGYSDAISADGTSIQTQAAILQ CCCEEEEECCCCCEEEEEEEECHHHHCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHH KASARLGAQRPIVLGQSYGGAVALAWATEFPQHTAAVVSVSGVSHPWDAELPTFYKLTSS HHHHHCCCCCCEEEECCCCCEEEEEEEHHCCCHHEEEEEECCCCCCCCCCCCHHHHHHHH RFGSAVIVPLLTAFVPKSYVRDSLKDVFAPQAVPDGFADHFGLAMSLRRSSLRANAKQRA CCCCCHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHH NLLTEVEAMAPKYPDLSMPIEVVHGTADTTVGISIHAERLVADSRTARLTPLPDVGHMPH HHHHHHHHHCCCCCCCCCCEEEEECCCCCEEEEEEEHHHHHHCCCCCCCCCCCCCCCCCC QTHTQEVVAAVHRAATRANLR CCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SAILALAVTLGFAGVAGFTALRAPLREAESIANHPPQGQFLNVDGHQIHVVERGQPQGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCEEEEEECCCCCCC APDLVLIHGSNGSIRDMTFRLSPALEEAYRILIFDRPGLGYSDAISADGTSIQTQAAILQ CCCEEEEECCCCCEEEEEEEECHHHHCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHH KASARLGAQRPIVLGQSYGGAVALAWATEFPQHTAAVVSVSGVSHPWDAELPTFYKLTSS HHHHHCCCCCCEEEECCCCCEEEEEEEHHCCCHHEEEEEECCCCCCCCCCCCHHHHHHHH RFGSAVIVPLLTAFVPKSYVRDSLKDVFAPQAVPDGFADHFGLAMSLRRSSLRANAKQRA CCCCCHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHH NLLTEVEAMAPKYPDLSMPIEVVHGTADTTVGISIHAERLVADSRTARLTPLPDVGHMPH HHHHHHHHHCCCCCCCCCCEEEEECCCCCEEEEEEEHHHHHHCCCCCCCCCCCCCCCCCC QTHTQEVVAAVHRAATRANLR CCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 2-hydroxy-6-ketononadienedicarboxylate; H2O [C]
Specific reaction: 2-hydroxy-6-ketononadienedicarboxylate + H2O = 2-oxopent-4-enoate + succinate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA