Click here to switch to the map view.

The map label for this gene is 99081218

Identifier: 99081218

GI number: 99081218

Start: 1471021

End: 1472160

Strand: Direct

Name: 99081218

Synonym: TM1040_1377

Alternate gene names: NA

Gene position: 1471021-1472160 (Clockwise)

Preceding gene: 99081217

Following gene: 99081219

Centisome position: 45.96

GC content: 59.3

Gene sequence:

>1140_bases
ATGAAACATTATATCGCGGCATCCGTTGCTTCGACGCTTCTGGCGACCACGGCGATGGCGAGCGGCTTGGACCGCACCGG
ACAGCCGATCGGACTGATTTTCGAGGAAGGCACCTATGCGGAGTTTTCCTTTGCCACGACATCGGTTGACCTGAGCGGCA
ACGACCGCACAAGCCTCAACCCGGCCGGTTCCGCAAGCGGCGACGTTGGCGAGCGTTTCAACATGCTTAGCGGCGGCTTC
AAGACCGACATCAATGATGAGCTGTCTCTGGCCATCATCTACGACCAGCCCTGGGGCGTGGACGTGGACTATCCGACCAC
CAACGGATCCGCACTGCTCGGCGGCACCATGGCGCAAGCGGATTCCAATGCCATCACCGCTCTGCTGCGCTATAAGCTCA
ATGATCGCTTCAGCGTGCACGGCGGTCTGCGCTATCAGGAGATCGACGGCGAGATCACCCTGGCAGGCGCAGCCTATAAC
GCCACGGTTCCCCTCTCCGGCTACAACGTGAAAGTGGACCGCGAAGGCGGCTTTGGCTGGGTTGCCGGTGTTGCCTACGA
GATCCCAGACATCGCGCTGCGGTTTGCCCTGACCTACCAGTCCGAAATCGAGCATGATTTCAATCTCACCGAAACAACGC
CTGCAGGCGTTCCGGTGATCGGCGGCACGACGCTGAATACTACCACCACCACCAAGACTCCTCAGTCTGTGAACCTCGAC
TTCCAGTCCGGCGTTGCCAAGGACACCATCGTCTTTGGTGGCATCCGCTGGGCCGAGCACAGTGTCACCGATCTTGTGGT
GCTTAGTGCGCTTGGTGGCCGTGATCTGATCGATCTGGATGACTCCATAACCTACACCATCGGTGTGGGACGCCGCTTCA
ACCAGAACTGGTCCGCATCGCTCGCGTATATCTATGAGGACGCGGATGGCGACAACCTCGTGTCTCCGCTGGCGCCGACC
CACGGGATGGAAGCGATCCGCCTTGGTGTGCAGTACCAGACCGAGAAAATGAAAATCGGCGCGGGCGTGCGCTACACCAA
GCTTGGGGATGCGGTTGCATCGCCGGGTGGTACGCCGGTTGCGAATTTCAACGACAACGATGCGCTGAGCTTTGCCGTCA
AGGTTGGCTTTTACTTCTAA

Upstream 100 bases:

>100_bases
CGCCCCGTCAACATTGCGAGATTTGTGACATTTCTTTTACGATTTTCCCCAGTAAGCGCTGCGCAACATCGTTTCGCGAC
GCGCCTGAGGGAGGATCTTT

Downstream 100 bases:

>100_bases
ACGCCGCATCAAAGGACACGGAACTGCCCCGCCCTCACTGGCGGGGCTTTTTTGTGGGTGACGCCGCGCCGCTTGGCGTC
TGGCGTCGCGCCTGTGATTG

Product: aromatic hydrocarbon degradation membrane protein

Products: NA

Alternate protein names: Outer Membrane Protein; Long-Chain Fatty Acid ABC Transporter; Outer Membrane Transporter Ompp1/Fadl/dx Family; Outer Membrane Transporter Family Protein; Outer Membrane Transporter; Aromatic Hydrocarbon Degradation Membrane Protein; Long-Chain Fatty Acid Protein; Transport Of Long-Chain Fatty Acids; OmpP1/FadL/dX Family Outer Membrane Transporter; FadL Family Outer Membrane Protein; Outer Membrane Protein E

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MKHYIAASVASTLLATTAMASGLDRTGQPIGLIFEEGTYAEFSFATTSVDLSGNDRTSLNPAGSASGDVGERFNMLSGGF
KTDINDELSLAIIYDQPWGVDVDYPTTNGSALLGGTMAQADSNAITALLRYKLNDRFSVHGGLRYQEIDGEITLAGAAYN
ATVPLSGYNVKVDREGGFGWVAGVAYEIPDIALRFALTYQSEIEHDFNLTETTPAGVPVIGGTTLNTTTTTKTPQSVNLD
FQSGVAKDTIVFGGIRWAEHSVTDLVVLSALGGRDLIDLDDSITYTIGVGRRFNQNWSASLAYIYEDADGDNLVSPLAPT
HGMEAIRLGVQYQTEKMKIGAGVRYTKLGDAVASPGGTPVANFNDNDALSFAVKVGFYF

Sequences:

>Translated_379_residues
MKHYIAASVASTLLATTAMASGLDRTGQPIGLIFEEGTYAEFSFATTSVDLSGNDRTSLNPAGSASGDVGERFNMLSGGF
KTDINDELSLAIIYDQPWGVDVDYPTTNGSALLGGTMAQADSNAITALLRYKLNDRFSVHGGLRYQEIDGEITLAGAAYN
ATVPLSGYNVKVDREGGFGWVAGVAYEIPDIALRFALTYQSEIEHDFNLTETTPAGVPVIGGTTLNTTTTTKTPQSVNLD
FQSGVAKDTIVFGGIRWAEHSVTDLVVLSALGGRDLIDLDDSITYTIGVGRRFNQNWSASLAYIYEDADGDNLVSPLAPT
HGMEAIRLGVQYQTEKMKIGAGVRYTKLGDAVASPGGTPVANFNDNDALSFAVKVGFYF
>Mature_379_residues
MKHYIAASVASTLLATTAMASGLDRTGQPIGLIFEEGTYAEFSFATTSVDLSGNDRTSLNPAGSASGDVGERFNMLSGGF
KTDINDELSLAIIYDQPWGVDVDYPTTNGSALLGGTMAQADSNAITALLRYKLNDRFSVHGGLRYQEIDGEITLAGAAYN
ATVPLSGYNVKVDREGGFGWVAGVAYEIPDIALRFALTYQSEIEHDFNLTETTPAGVPVIGGTTLNTTTTTKTPQSVNLD
FQSGVAKDTIVFGGIRWAEHSVTDLVVLSALGGRDLIDLDDSITYTIGVGRRFNQNWSASLAYIYEDADGDNLVSPLAPT
HGMEAIRLGVQYQTEKMKIGAGVRYTKLGDAVASPGGTPVANFNDNDALSFAVKVGFYF

Specific function: Unknown

COG id: COG2067

COG function: function code I; Long-chain fatty acid transport protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40314; Mature: 40314

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHYIAASVASTLLATTAMASGLDRTGQPIGLIFEEGTYAEFSFATTSVDLSGNDRTSLN
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEEEEEEEEEECCCCCCCCC
PAGSASGDVGERFNMLSGGFKTDINDELSLAIIYDQPWGVDVDYPTTNGSALLGGTMAQA
CCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCEECCCCCCCCEEECCCHHCC
DSNAITALLRYKLNDRFSVHGGLRYQEIDGEITLAGAAYNATVPLSGYNVKVDREGGFGW
CCHHEEEEEEEECCCEEEECCCEEEEEECCEEEEEEEEEEEEEECCCCEEEEECCCCCEE
VAGVAYEIPDIALRFALTYQSEIEHDFNLTETTPAGVPVIGGTTLNTTTTTKTPQSVNLD
EEEEEECCCCEEEEEEEEEHHHCCCCCCCCCCCCCCCEEECCCEECCEECCCCCCEEEEE
FQSGVAKDTIVFGGIRWAEHSVTDLVVLSALGGRDLIDLDDSITYTIGVGRRFNQNWSAS
HHCCCCCCEEEEECEEECCCCHHHEEEEECCCCCCEEECCCCEEEEEECCCCCCCCCCEE
LAYIYEDADGDNLVSPLAPTHGMEAIRLGVQYQTEKMKIGAGVRYTKLGDAVASPGGTPV
EEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEEECCCEEEEECCHHHCCCCCCEE
ANFNDNDALSFAVKVGFYF
CCCCCCCEEEEEEEEEECC
>Mature Secondary Structure
MKHYIAASVASTLLATTAMASGLDRTGQPIGLIFEEGTYAEFSFATTSVDLSGNDRTSLN
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEEEEEEEEEECCCCCCCCC
PAGSASGDVGERFNMLSGGFKTDINDELSLAIIYDQPWGVDVDYPTTNGSALLGGTMAQA
CCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCEECCCCCCCCEEECCCHHCC
DSNAITALLRYKLNDRFSVHGGLRYQEIDGEITLAGAAYNATVPLSGYNVKVDREGGFGW
CCHHEEEEEEEECCCEEEECCCEEEEEECCEEEEEEEEEEEEEECCCCEEEEECCCCCEE
VAGVAYEIPDIALRFALTYQSEIEHDFNLTETTPAGVPVIGGTTLNTTTTTKTPQSVNLD
EEEEEECCCCEEEEEEEEEHHHCCCCCCCCCCCCCCCEEECCCEECCEECCCCCCEEEEE
FQSGVAKDTIVFGGIRWAEHSVTDLVVLSALGGRDLIDLDDSITYTIGVGRRFNQNWSAS
HHCCCCCCEEEEECEEECCCCHHHEEEEECCCCCCEEECCCCEEEEEECCCCCCCCCCEE
LAYIYEDADGDNLVSPLAPTHGMEAIRLGVQYQTEKMKIGAGVRYTKLGDAVASPGGTPV
EEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEEECCCEEEEECCHHHCCCCCCEE
ANFNDNDALSFAVKVGFYF
CCCCCCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA