Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is usg [H]

Identifier: 99081172

GI number: 99081172

Start: 1417659

End: 1417928

Strand: Reverse

Name: usg [H]

Synonym: TM1040_1331

Alternate gene names: 99081172

Gene position: 1417928-1417659 (Counterclockwise)

Preceding gene: 99081175

Following gene: 99081171

Centisome position: 44.3

GC content: 52.96

Gene sequence:

>270_bases
ATGGCGCCATCAGAGACAGAATTGATGCTCAAGGGATATGGGCTCACAACGGCCGAATTGACCTACAGAATGCCCGACTA
CGCCCATGTCTTGAACACCTTCGTCTGGCAAGACTATGATCTCGCCCCGGACCACCCACGATTGTTTTCCTTCATCGAGT
TCTGGCAGGAAGAGATAGAAGGAGCCCTTCATCACGTTCGCTTTGCGCATCGCAAGATGGTTTCCGCCGGGGAATGGCGA
AACGTCGTCGGCGAATTCTACATCAACTAG

Upstream 100 bases:

>100_bases
CCTTAGCAGCATCTACGGATAACTGCTAACAAACTGATTTATTTGAAAATTTACCTATCATGAATAGGCTGGGTGTATCG
AAACTTTTCGGAGGACACAA

Downstream 100 bases:

>100_bases
ATCCGGTTCGATGGCTTGGCCTTTGCGGCAAGCTGTGACACTGTTTTGAACAGACGATTTCATCCTGCGGGATGCGACCT
CAAGTTTCAGGAGCAGTGTC

Product: Usg-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 89; Mature: 88

Protein sequence:

>89_residues
MAPSETELMLKGYGLTTAELTYRMPDYAHVLNTFVWQDYDLAPDHPRLFSFIEFWQEEIEGALHHVRFAHRKMVSAGEWR
NVVGEFYIN

Sequences:

>Translated_89_residues
MAPSETELMLKGYGLTTAELTYRMPDYAHVLNTFVWQDYDLAPDHPRLFSFIEFWQEEIEGALHHVRFAHRKMVSAGEWR
NVVGEFYIN
>Mature_88_residues
APSETELMLKGYGLTTAELTYRMPDYAHVLNTFVWQDYDLAPDHPRLFSFIEFWQEEIEGALHHVRFAHRKMVSAGEWRN
VVGEFYIN

Specific function: Probably necessary for the cotranslation of trpF. It may also function as a subunit or stabilizer of phosphoribosylanthranilate isomerase (trpF) [H]

COG id: COG5425

COG function: function code E; Usg protein, probable subunit of phosphoribosylanthranilate isomerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009354 [H]

Pfam domain/function: PF06233 Usg [H]

EC number: NA

Molecular weight: Translated: 10522; Mature: 10391

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPSETELMLKGYGLTTAELTYRMPDYAHVLNTFVWQDYDLAPDHPRLFSFIEFWQEEIE
CCCCCCEEEEECCCCCHHHHEECCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
GALHHVRFAHRKMVSAGEWRNVVGEFYIN
HHHHHHHHHHHHHHCCCHHHHHHHHHCCC
>Mature Secondary Structure 
APSETELMLKGYGLTTAELTYRMPDYAHVLNTFVWQDYDLAPDHPRLFSFIEFWQEEIE
CCCCCEEEEECCCCCHHHHEECCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
GALHHVRFAHRKMVSAGEWRNVVGEFYIN
HHHHHHHHHHHHHHCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2828322; 11259647 [H]