| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is usg [H]
Identifier: 99081172
GI number: 99081172
Start: 1417659
End: 1417928
Strand: Reverse
Name: usg [H]
Synonym: TM1040_1331
Alternate gene names: 99081172
Gene position: 1417928-1417659 (Counterclockwise)
Preceding gene: 99081175
Following gene: 99081171
Centisome position: 44.3
GC content: 52.96
Gene sequence:
>270_bases ATGGCGCCATCAGAGACAGAATTGATGCTCAAGGGATATGGGCTCACAACGGCCGAATTGACCTACAGAATGCCCGACTA CGCCCATGTCTTGAACACCTTCGTCTGGCAAGACTATGATCTCGCCCCGGACCACCCACGATTGTTTTCCTTCATCGAGT TCTGGCAGGAAGAGATAGAAGGAGCCCTTCATCACGTTCGCTTTGCGCATCGCAAGATGGTTTCCGCCGGGGAATGGCGA AACGTCGTCGGCGAATTCTACATCAACTAG
Upstream 100 bases:
>100_bases CCTTAGCAGCATCTACGGATAACTGCTAACAAACTGATTTATTTGAAAATTTACCTATCATGAATAGGCTGGGTGTATCG AAACTTTTCGGAGGACACAA
Downstream 100 bases:
>100_bases ATCCGGTTCGATGGCTTGGCCTTTGCGGCAAGCTGTGACACTGTTTTGAACAGACGATTTCATCCTGCGGGATGCGACCT CAAGTTTCAGGAGCAGTGTC
Product: Usg-like
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 89; Mature: 88
Protein sequence:
>89_residues MAPSETELMLKGYGLTTAELTYRMPDYAHVLNTFVWQDYDLAPDHPRLFSFIEFWQEEIEGALHHVRFAHRKMVSAGEWR NVVGEFYIN
Sequences:
>Translated_89_residues MAPSETELMLKGYGLTTAELTYRMPDYAHVLNTFVWQDYDLAPDHPRLFSFIEFWQEEIEGALHHVRFAHRKMVSAGEWR NVVGEFYIN >Mature_88_residues APSETELMLKGYGLTTAELTYRMPDYAHVLNTFVWQDYDLAPDHPRLFSFIEFWQEEIEGALHHVRFAHRKMVSAGEWRN VVGEFYIN
Specific function: Probably necessary for the cotranslation of trpF. It may also function as a subunit or stabilizer of phosphoribosylanthranilate isomerase (trpF) [H]
COG id: COG5425
COG function: function code E; Usg protein, probable subunit of phosphoribosylanthranilate isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009354 [H]
Pfam domain/function: PF06233 Usg [H]
EC number: NA
Molecular weight: Translated: 10522; Mature: 10391
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPSETELMLKGYGLTTAELTYRMPDYAHVLNTFVWQDYDLAPDHPRLFSFIEFWQEEIE CCCCCCEEEEECCCCCHHHHEECCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH GALHHVRFAHRKMVSAGEWRNVVGEFYIN HHHHHHHHHHHHHHCCCHHHHHHHHHCCC >Mature Secondary Structure APSETELMLKGYGLTTAELTYRMPDYAHVLNTFVWQDYDLAPDHPRLFSFIEFWQEEIE CCCCCEEEEECCCCCHHHHEECCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH GALHHVRFAHRKMVSAGEWRNVVGEFYIN HHHHHHHHHHHHHHCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2828322; 11259647 [H]