Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99081168

Identifier: 99081168

GI number: 99081168

Start: 1413693

End: 1414379

Strand: Direct

Name: 99081168

Synonym: TM1040_1327

Alternate gene names: NA

Gene position: 1413693-1414379 (Clockwise)

Preceding gene: 99081167

Following gene: 99081169

Centisome position: 44.16

GC content: 59.68

Gene sequence:

>687_bases
ATGGCAAAGATACTGATCGGTTGTGAAACCAGCGGCATCGCCCGGCGCGCCTTTGAGGCCCTCGGCCATGACGTCTGGTC
TTGCGACATTGAGGCCGCAGAGGATGGCTCCAACCGCCATATCCGCTGCGACATTCGCGACGGTATACTTGACGAGGGCT
GGGATCTTTTGACCGTGATGCACCCGCCTTGCACACGCTTGTGTCGTTCCGGCCGTCGCTGGATGAGTGGCCCCGGCAAG
TGGACCCGCCCCCGTCAACTCCCAAAGGGGAAGACCTGGCAAGACATGCGCGACGACTTTGAGGAAGGCGTCAGTATTTT
TACTGCTTGCTGGCGCGCTCCGATTGATCGGGTCGCTATCGAAAACCCGGTGATGAACGACCTCGCCAAAGATCGAATGC
CCGCAGATTTGCCAGCACCGCACCTTGTGCAACCGTTCTGGTTTGGTGAGCCGACCTATAAAGCGACAGGATGGTATCTG
CGCGGCCTTTCACCCTTGGTCGAGACCAACCGGCTCAAGGAGCCGGAACGCGGATCCGATGAGTGGAAGAAATGGAACCG
TATTCATCGGATGTCGCCCAGCGCGGAGCGCACCCGACTGCGCAGCCGATCCTTCCCCGGAATGATGGAAGCCGCCGCTC
TGCAATGGGGCGACCAAGCATCAAAGCAATATGCCGCCGCGGCTTAA

Upstream 100 bases:

>100_bases
CCTTTTCTCACACCCTGCGGATAGTGCCGCAGCGCCCGGGGCCACGTCCACCACTCACGCGAACCAAAGCGCCCCGGGCA
AAATTCCAAAGGTGATCCAA

Downstream 100 bases:

>100_bases
TCCACGAACCAACCGAAAGGCCTAAAGATGAATGCTCATACTGAAATCAAATCCGATCACGCGATTGAGTCTTTGACGGT
TGGTATTGGCGCCCAATGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 228; Mature: 227

Protein sequence:

>228_residues
MAKILIGCETSGIARRAFEALGHDVWSCDIEAAEDGSNRHIRCDIRDGILDEGWDLLTVMHPPCTRLCRSGRRWMSGPGK
WTRPRQLPKGKTWQDMRDDFEEGVSIFTACWRAPIDRVAIENPVMNDLAKDRMPADLPAPHLVQPFWFGEPTYKATGWYL
RGLSPLVETNRLKEPERGSDEWKKWNRIHRMSPSAERTRLRSRSFPGMMEAAALQWGDQASKQYAAAA

Sequences:

>Translated_228_residues
MAKILIGCETSGIARRAFEALGHDVWSCDIEAAEDGSNRHIRCDIRDGILDEGWDLLTVMHPPCTRLCRSGRRWMSGPGK
WTRPRQLPKGKTWQDMRDDFEEGVSIFTACWRAPIDRVAIENPVMNDLAKDRMPADLPAPHLVQPFWFGEPTYKATGWYL
RGLSPLVETNRLKEPERGSDEWKKWNRIHRMSPSAERTRLRSRSFPGMMEAAALQWGDQASKQYAAAA
>Mature_227_residues
AKILIGCETSGIARRAFEALGHDVWSCDIEAAEDGSNRHIRCDIRDGILDEGWDLLTVMHPPCTRLCRSGRRWMSGPGKW
TRPRQLPKGKTWQDMRDDFEEGVSIFTACWRAPIDRVAIENPVMNDLAKDRMPADLPAPHLVQPFWFGEPTYKATGWYLR
GLSPLVETNRLKEPERGSDEWKKWNRIHRMSPSAERTRLRSRSFPGMMEAAALQWGDQASKQYAAAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26052; Mature: 25921

Theoretical pI: Translated: 8.38; Mature: 8.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKILIGCETSGIARRAFEALGHDVWSCDIEAAEDGSNRHIRCDIRDGILDEGWDLLTVM
CCEEEEECCCCHHHHHHHHHHCCCCEECCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEC
HPPCTRLCRSGRRWMSGPGKWTRPRQLPKGKTWQDMRDDFEEGVSIFTACWRAPIDRVAI
CCCHHHHHHCCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHH
ENPVMNDLAKDRMPADLPAPHLVQPFWFGEPTYKATGWYLRGLSPLVETNRLKEPERGSD
CCHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCHHHHCCCHHHHHHCCCCCCCCCH
EWKKWNRIHRMSPSAERTRLRSRSFPGMMEAAALQWGDQASKQYAAAA
HHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHCCC
>Mature Secondary Structure 
AKILIGCETSGIARRAFEALGHDVWSCDIEAAEDGSNRHIRCDIRDGILDEGWDLLTVM
CEEEEECCCCHHHHHHHHHHCCCCEECCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEC
HPPCTRLCRSGRRWMSGPGKWTRPRQLPKGKTWQDMRDDFEEGVSIFTACWRAPIDRVAI
CCCHHHHHHCCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHH
ENPVMNDLAKDRMPADLPAPHLVQPFWFGEPTYKATGWYLRGLSPLVETNRLKEPERGSD
CCHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCHHHHCCCHHHHHHCCCCCCCCCH
EWKKWNRIHRMSPSAERTRLRSRSFPGMMEAAALQWGDQASKQYAAAA
HHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA