| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99081167
Identifier: 99081167
GI number: 99081167
Start: 1413107
End: 1413550
Strand: Direct
Name: 99081167
Synonym: TM1040_1326
Alternate gene names: NA
Gene position: 1413107-1413550 (Clockwise)
Preceding gene: 99081166
Following gene: 99081168
Centisome position: 44.15
GC content: 60.14
Gene sequence:
>444_bases ATGAACACCACGCGGCAAGGTTTTGAGGATTGGCTTTGCCGCGCATTCCAGAGGTTTCGCACCCGTCTTGCGGTGCGGAT CGGGCGCGGGCGGTTCAATCCTCCAAATTGCACGCCGCCCGCGCATTTACCGAGAGAGAGCATGACCCCCTATTCCGCTG CCCAGATCCTGAAAGCCACGCCCCTACTCAACCGCGCGCGCAAATTTCGTGAGCTCGGCGGCAACATCTGGCGTCCAGAT CATGACCCATGGGTTTATGAAGAAATGCTTTGGATGGTTGATCTTCACGGCATCCGCGTCGACGCGCCTACCAGAGGCCA AGCGATTTCGCTTTGGATCGAGGCAGCAATCAGCCGCACGACCAAACGCGCGACCGACGGTCGCCCAGATTGCCCGTTCA ACGGCCAAGAAAGCGCGCCGTCCAAGATCCCCGTCGAGGCCTGA
Upstream 100 bases:
>100_bases CCATGCGGCGTAATGCCCGACGCAGCCGCAATGCCCCTCCGTTCTTCGCGGTAAGCGCGGCGCATATCGGGCAGCCCCCA CGGGCTCCACCCGCCCCAAT
Downstream 100 bases:
>100_bases AACCTGCCTCTGACCAACTGGCAGGGGTGATCGCACCCCTGCCCTTTTCTCACACCCTGCGGATAGTGCCGCAGCGCCCG GGGCCACGTCCACCACTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MNTTRQGFEDWLCRAFQRFRTRLAVRIGRGRFNPPNCTPPAHLPRESMTPYSAAQILKATPLLNRARKFRELGGNIWRPD HDPWVYEEMLWMVDLHGIRVDAPTRGQAISLWIEAAISRTTKRATDGRPDCPFNGQESAPSKIPVEA
Sequences:
>Translated_147_residues MNTTRQGFEDWLCRAFQRFRTRLAVRIGRGRFNPPNCTPPAHLPRESMTPYSAAQILKATPLLNRARKFRELGGNIWRPD HDPWVYEEMLWMVDLHGIRVDAPTRGQAISLWIEAAISRTTKRATDGRPDCPFNGQESAPSKIPVEA >Mature_147_residues MNTTRQGFEDWLCRAFQRFRTRLAVRIGRGRFNPPNCTPPAHLPRESMTPYSAAQILKATPLLNRARKFRELGGNIWRPD HDPWVYEEMLWMVDLHGIRVDAPTRGQAISLWIEAAISRTTKRATDGRPDCPFNGQESAPSKIPVEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16826; Mature: 16826
Theoretical pI: Translated: 10.53; Mature: 10.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTTRQGFEDWLCRAFQRFRTRLAVRIGRGRFNPPNCTPPAHLPRESMTPYSAAQILKAT CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH PLLNRARKFRELGGNIWRPDHDPWVYEEMLWMVDLHGIRVDAPTRGQAISLWIEAAISRT HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHHH TKRATDGRPDCPFNGQESAPSKIPVEA HHHCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNTTRQGFEDWLCRAFQRFRTRLAVRIGRGRFNPPNCTPPAHLPRESMTPYSAAQILKAT CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH PLLNRARKFRELGGNIWRPDHDPWVYEEMLWMVDLHGIRVDAPTRGQAISLWIEAAISRT HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHHH TKRATDGRPDCPFNGQESAPSKIPVEA HHHCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA