| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99081155
Identifier: 99081155
GI number: 99081155
Start: 1402391
End: 1402690
Strand: Reverse
Name: 99081155
Synonym: TM1040_1314
Alternate gene names: NA
Gene position: 1402690-1402391 (Counterclockwise)
Preceding gene: 99081156
Following gene: 99081154
Centisome position: 43.82
GC content: 60.0
Gene sequence:
>300_bases ATGAGCAACCATGCTGACCCCGACACCCATGGCCACCGCTTTGGAGCTGTGGTCGTGACCGTCGATCTCGCACTGGGCGA TTGCGTGATCCGCGCCCCGCAACCCAGCAAGGGACCGTTGCAGACTATCGACCGGCAAACGCGGTTCAACTCTCTCGACG AGATCCGCGAAGCCTATCGAACTCAAAACTGGCTTAGCCGGAAACCTCAACAGCACCCGCACGCCGGAGACATGGCAAGC GCCCTCAAATTCGCAGGACAGCGCCTCAAGGCTGAACAGGAAAGGAAACGCCGTGGTTGA
Upstream 100 bases:
>100_bases CGAAGTGCATCCGTGCCGGGAAGGTGACCGCTGCGGACTGCCGTAGGGCTGGACTTCGCATCACCGACGCAGAGGCGCAA GCCATGCTTGAGGTGGCGCA
Downstream 100 bases:
>100_bases TCAAGCCTCTGACGTTTGCGCGGAACTCAGCAAGACGCCAGTCGACTTCCCATTGCTCGCCAAGGCCGCACAGATCCTCA TTGAGGACCAGAAGGCCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 99; Mature: 98
Protein sequence:
>99_residues MSNHADPDTHGHRFGAVVVTVDLALGDCVIRAPQPSKGPLQTIDRQTRFNSLDEIREAYRTQNWLSRKPQQHPHAGDMAS ALKFAGQRLKAEQERKRRG
Sequences:
>Translated_99_residues MSNHADPDTHGHRFGAVVVTVDLALGDCVIRAPQPSKGPLQTIDRQTRFNSLDEIREAYRTQNWLSRKPQQHPHAGDMAS ALKFAGQRLKAEQERKRRG >Mature_98_residues SNHADPDTHGHRFGAVVVTVDLALGDCVIRAPQPSKGPLQTIDRQTRFNSLDEIREAYRTQNWLSRKPQQHPHAGDMASA LKFAGQRLKAEQERKRRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11170; Mature: 11039
Theoretical pI: Translated: 10.65; Mature: 10.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNHADPDTHGHRFGAVVVTVDLALGDCVIRAPQPSKGPLQTIDRQTRFNSLDEIREAYR CCCCCCCCCCCCCHHHHEEEEECHHCCEEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHH TQNWLSRKPQQHPHAGDMASALKFAGQRLKAEQERKRRG HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SNHADPDTHGHRFGAVVVTVDLALGDCVIRAPQPSKGPLQTIDRQTRFNSLDEIREAYR CCCCCCCCCCCCHHHHEEEEECHHCCEEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHH TQNWLSRKPQQHPHAGDMASALKFAGQRLKAEQERKRRG HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA