Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99081150

Identifier: 99081150

GI number: 99081150

Start: 1399675

End: 1400223

Strand: Reverse

Name: 99081150

Synonym: TM1040_1309

Alternate gene names: NA

Gene position: 1400223-1399675 (Counterclockwise)

Preceding gene: 99081151

Following gene: 99081147

Centisome position: 43.74

GC content: 50.27

Gene sequence:

>549_bases
ATGTCGCGTATTAAAAACTTCGGCTCTTTTTTGGGTGGTGTCGGAACAGCTGTAGCAGCAAGTATTGGAGCGTATTCTCT
TTTCTATCCGGGTAAGCTTGCAATCGAATCCCCACCCGACTTGATCGAAAGTGTTGGAAGTCTTTCATCCGCACTTGACG
GACTGAGCCTAGCGTTGACGGAAGATGAAAGCGAGGCACTCAAGCAACGGCTTCAGTCACTGGAAACGCAAATCGCACGA
ACGATTACAACAGGTGACAACGATCAGCTTCCCTTTGTGCCACGTAGCTTCCAAGGGCTTAGAACCTTTGAGCAAAACGT
AGCTTACGACTTTATCGCTCCTAATGGTGTCAGCCGCCTTCTAGTTTTCGAGGATACGAACTCCGGGAGTGCGATGTTCG
TACAGGTCGATGGCGCGCCCGCTGAAGTCAATGCTTGGCCGACAATCGGCCAACATATCGATATCGAGTTTGGCAACGAG
AGCTGTCGCTTCGAGTTCATTGACCTAGAACGTGGGAGCAGCATCACATCGCGAGTAAACTGCAGTTGA

Upstream 100 bases:

>100_bases
ACTGTGGTGGACGTGCGAGCCTGCGTGAGTTGGTTTTTGCGTACATCAAAGATTGAAAAACTTGATAAGTCGGCCTTTTC
GTATTTTCTAGGAGCTCCGT

Downstream 100 bases:

>100_bases
AGGCGGTAGTGCCTGTACTCTTTTATGATTTCTCTAACTGAAACCAGATTTGTATCCCAGACTTTGGGGGCCGTTTAGTC
CCTACTCAACAGGTATCCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 181

Protein sequence:

>182_residues
MSRIKNFGSFLGGVGTAVAASIGAYSLFYPGKLAIESPPDLIESVGSLSSALDGLSLALTEDESEALKQRLQSLETQIAR
TITTGDNDQLPFVPRSFQGLRTFEQNVAYDFIAPNGVSRLLVFEDTNSGSAMFVQVDGAPAEVNAWPTIGQHIDIEFGNE
SCRFEFIDLERGSSITSRVNCS

Sequences:

>Translated_182_residues
MSRIKNFGSFLGGVGTAVAASIGAYSLFYPGKLAIESPPDLIESVGSLSSALDGLSLALTEDESEALKQRLQSLETQIAR
TITTGDNDQLPFVPRSFQGLRTFEQNVAYDFIAPNGVSRLLVFEDTNSGSAMFVQVDGAPAEVNAWPTIGQHIDIEFGNE
SCRFEFIDLERGSSITSRVNCS
>Mature_181_residues
SRIKNFGSFLGGVGTAVAASIGAYSLFYPGKLAIESPPDLIESVGSLSSALDGLSLALTEDESEALKQRLQSLETQIART
ITTGDNDQLPFVPRSFQGLRTFEQNVAYDFIAPNGVSRLLVFEDTNSGSAMFVQVDGAPAEVNAWPTIGQHIDIEFGNES
CRFEFIDLERGSSITSRVNCS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19591; Mature: 19460

Theoretical pI: Translated: 4.15; Mature: 4.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRIKNFGSFLGGVGTAVAASIGAYSLFYPGKLAIESPPDLIESVGSLSSALDGLSLALT
CCHHHHHHHHHHHHHHHHHHHHCCEEEECCCEEEECCCHHHHHHHHHHHHHHCCEEEEEE
EDESEALKQRLQSLETQIARTITTGDNDQLPFVPRSFQGLRTFEQNVAYDFIAPNGVSRL
CCHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHHCEEEEECCCCCEEE
LVFEDTNSGSAMFVQVDGAPAEVNAWPTIGQHIDIEFGNESCRFEFIDLERGSSITSRVN
EEEEECCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCEEC
CS
CC
>Mature Secondary Structure 
SRIKNFGSFLGGVGTAVAASIGAYSLFYPGKLAIESPPDLIESVGSLSSALDGLSLALT
CHHHHHHHHHHHHHHHHHHHHCCEEEECCCEEEECCCHHHHHHHHHHHHHHCCEEEEEE
EDESEALKQRLQSLETQIARTITTGDNDQLPFVPRSFQGLRTFEQNVAYDFIAPNGVSRL
CCHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHHCEEEEECCCCCEEE
LVFEDTNSGSAMFVQVDGAPAEVNAWPTIGQHIDIEFGNESCRFEFIDLERGSSITSRVN
EEEEECCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCEEC
CS
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA