Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is phoU [H]

Identifier: 99081099

GI number: 99081099

Start: 1355247

End: 1355957

Strand: Reverse

Name: phoU [H]

Synonym: TM1040_1258

Alternate gene names: 99081099

Gene position: 1355957-1355247 (Counterclockwise)

Preceding gene: 99081100

Following gene: 99081098

Centisome position: 42.36

GC content: 59.07

Gene sequence:

>711_bases
ATGGTTGAACAACATATTGCATCTGCATTCGACCGCGACCTGGAGGCCATTCAGGCCCGGATCATGAAGATGGGCGGGCT
TGTCGAGGCCGCCATCATGGAAGGCGCGCGCGCGCTTGAAACACGCGACGAAGAGCTGGCCGCAAAAGTGGTGCAGGACG
ACAAAGCCATCGACGGACTCGAAGAGCTGATCAATGAGGATGCCGCCCGCGTGATCGCCATCCGCGCACCGGCCGCCGTT
GATCTGCGCGTCGTGCTCAGCGTCATCAAGATCTCGGGCCACCTGGAGCGGGTTGGCGACTATGCCAAGAACATGGCGAA
ACGAACCAGCGTTCTGGCCCAGAGCCCATCAGTGGCCGACAGTGCAGCAGCCTTGCGGCGCATGGCGCGTGAGGTGGAGT
TGATGCTCCGGGACGCGCTCGACAGCTATATTCAGCGAGATGATGAGCTGGCGCGCGACGTGATCCAGCGCGACCGCGAC
GTGGACCAGATGTACAACGCTCTGTTTCGGGAGTTCCTCACGCATATGATGGAAGACCCGCGCAACATTTCGTCCTGTAT
GCACCTGCACTTTATTGCAAAAAACATCGAACGCATGGGCGATCATGTCACCGCGATCGCAGAGCAGGTGGTCTATCTCG
TGACCGGCAACAAGCCCGAGGAAGAACGCACAAAAGCCGACAATACGTCGGTGACCATGCAGGAGATCTAA

Upstream 100 bases:

>100_bases
GTGGAGTTCGGCCCAACCGGTCAGATCTTTACCAATCCCGAAGATCCGCGCACCGAAAGCTACATCACTGGCCGCATCGG
CTAAGTTGGAGACATATCAA

Downstream 100 bases:

>100_bases
GCCATGGCAGTCGATCAGCCTACTGTTCTGGTCGTCGAGGACGAACTGGCGCAGCGCGAAGTGCTTGCTTACAATCTGGA
GGCGGACGGCTTTCGGGTGA

Product: phosphate uptake regulator, PhoU

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MVEQHIASAFDRDLEAIQARIMKMGGLVEAAIMEGARALETRDEELAAKVVQDDKAIDGLEELINEDAARVIAIRAPAAV
DLRVVLSVIKISGHLERVGDYAKNMAKRTSVLAQSPSVADSAAALRRMAREVELMLRDALDSYIQRDDELARDVIQRDRD
VDQMYNALFREFLTHMMEDPRNISSCMHLHFIAKNIERMGDHVTAIAEQVVYLVTGNKPEEERTKADNTSVTMQEI

Sequences:

>Translated_236_residues
MVEQHIASAFDRDLEAIQARIMKMGGLVEAAIMEGARALETRDEELAAKVVQDDKAIDGLEELINEDAARVIAIRAPAAV
DLRVVLSVIKISGHLERVGDYAKNMAKRTSVLAQSPSVADSAAALRRMAREVELMLRDALDSYIQRDDELARDVIQRDRD
VDQMYNALFREFLTHMMEDPRNISSCMHLHFIAKNIERMGDHVTAIAEQVVYLVTGNKPEEERTKADNTSVTMQEI
>Mature_236_residues
MVEQHIASAFDRDLEAIQARIMKMGGLVEAAIMEGARALETRDEELAAKVVQDDKAIDGLEELINEDAARVIAIRAPAAV
DLRVVLSVIKISGHLERVGDYAKNMAKRTSVLAQSPSVADSAAALRRMAREVELMLRDALDSYIQRDDELARDVIQRDRD
VDQMYNALFREFLTHMMEDPRNISSCMHLHFIAKNIERMGDHVTAIAEQVVYLVTGNKPEEERTKADNTSVTMQEI

Specific function: Not known; probably involved in phosphate transport and/or metabolism [H]

COG id: COG0704

COG function: function code P; Phosphate uptake regulator

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phoU family [H]

Homologues:

Organism=Escherichia coli, GI1790161, Length=215, Percent_Identity=35.8139534883721, Blast_Score=142, Evalue=2e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008170 [H]

Pfam domain/function: PF01895 PhoU [H]

EC number: NA

Molecular weight: Translated: 26477; Mature: 26477

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEQHIASAFDRDLEAIQARIMKMGGLVEAAIMEGARALETRDEELAAKVVQDDKAIDGL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EELINEDAARVIAIRAPAAVDLRVVLSVIKISGHLERVGDYAKNMAKRTSVLAQSPSVAD
HHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
SAAALRRMAREVELMLRDALDSYIQRDDELARDVIQRDRDVDQMYNALFREFLTHMMEDP
HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC
RNISSCMHLHFIAKNIERMGDHVTAIAEQVVYLVTGNKPEEERTKADNTSVTMQEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHCCCCCCEEHHCC
>Mature Secondary Structure
MVEQHIASAFDRDLEAIQARIMKMGGLVEAAIMEGARALETRDEELAAKVVQDDKAIDGL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EELINEDAARVIAIRAPAAVDLRVVLSVIKISGHLERVGDYAKNMAKRTSVLAQSPSVAD
HHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
SAAALRRMAREVELMLRDALDSYIQRDDELARDVIQRDRDVDQMYNALFREFLTHMMEDP
HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC
RNISSCMHLHFIAKNIERMGDHVTAIAEQVVYLVTGNKPEEERTKADNTSVTMQEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHCCCCCCEEHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]