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The map label for this gene is yafJ [C]

Identifier: 99081075

GI number: 99081075

Start: 1329844

End: 1330620

Strand: Direct

Name: yafJ [C]

Synonym: TM1040_1234

Alternate gene names: 99081075

Gene position: 1329844-1330620 (Clockwise)

Preceding gene: 99081074

Following gene: 99081081

Centisome position: 41.55

GC content: 60.49

Gene sequence:

>777_bases
ATGTGCCGTTGGGCCGCCTATATTGGTCCCCCCGTCCATCTGGACGAAGTCGTGTGCAAGCCCGAGCATTCGCTGGTCGC
GCAATCTGTCCACGCCTTTGAGTGTAAAACACAAACCAATGCCGACGGATTTGGGATCGCCTGGTATGACAGCCGCGAGG
AACCGGGGCTTTATCGCGACACCCACCCGGCCTGGTCCGATCCGAACCTGAAGTCGATCACCCATCAGGTGCGCTCCGGG
TTGTTTCTGGCGCATGTGCGCGCCTCAACCGGAACCGCGACCAGTCGCAATAACTGTCATCCCTTCACCCATGGGTGCTG
GTCCTTCATGCACAACGGTCAGGTGGGCGGGTTTGAAAACTTTCGCCGTCGCGCCGATATGATAATCCCGGATGAGCTTT
ATTCTGCGCGAAAGGGGGCGACGGATAGCGAAGCGCTGTTCCTGATCGCCATAGCGGAAGGGCTCTACGAGGACCCCAAG
GGCGCCATGCAGCGCGCAGTCGGCAGGCTGGAGGCGTTGAGCAGAGAGTTTGGTCACACACCCCACATGCGGATTGGCGC
GGCCTTCAGCTGCGGCGGCGCTCTCTATGCGGTGCGCTATGCCTCGGATCACCTCGCACCCACGGTCTACAGCAGCAAAA
GCGCAGATGGCACCGGGCGGCTCGTGGTGTCCGAGCCCCTCCACAAAGGCGAATGCTGGGAAGCAGTTCCCGCAGGATCT
TTCTGCCGTTTCACGGCTGATGACACGGAGATCGAGGACTTTGTCCCTCAATTCTGA

Upstream 100 bases:

>100_bases
ACAGAAGATTGGGCTGCGCGTTTCGCGTGGCCCTTTTTCGTGATTAACAGCACCTTGACGTCTGGGTGAGAGAATAGCCA
GACGAGTTGAGGAGAACATC

Downstream 100 bases:

>100_bases
TACCAAGCGCTCAAATGAAAAGGCCCGGTCAGTTTTGACCGGGCCTTTTTGCATTTCTGAGGGGGCGATCAGCTGTTCGC
CTTGGCCATCCGCTTGCGCT

Product: glutamine amidotransferase, class-II

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MCRWAAYIGPPVHLDEVVCKPEHSLVAQSVHAFECKTQTNADGFGIAWYDSREEPGLYRDTHPAWSDPNLKSITHQVRSG
LFLAHVRASTGTATSRNNCHPFTHGCWSFMHNGQVGGFENFRRRADMIIPDELYSARKGATDSEALFLIAIAEGLYEDPK
GAMQRAVGRLEALSREFGHTPHMRIGAAFSCGGALYAVRYASDHLAPTVYSSKSADGTGRLVVSEPLHKGECWEAVPAGS
FCRFTADDTEIEDFVPQF

Sequences:

>Translated_258_residues
MCRWAAYIGPPVHLDEVVCKPEHSLVAQSVHAFECKTQTNADGFGIAWYDSREEPGLYRDTHPAWSDPNLKSITHQVRSG
LFLAHVRASTGTATSRNNCHPFTHGCWSFMHNGQVGGFENFRRRADMIIPDELYSARKGATDSEALFLIAIAEGLYEDPK
GAMQRAVGRLEALSREFGHTPHMRIGAAFSCGGALYAVRYASDHLAPTVYSSKSADGTGRLVVSEPLHKGECWEAVPAGS
FCRFTADDTEIEDFVPQF
>Mature_258_residues
MCRWAAYIGPPVHLDEVVCKPEHSLVAQSVHAFECKTQTNADGFGIAWYDSREEPGLYRDTHPAWSDPNLKSITHQVRSG
LFLAHVRASTGTATSRNNCHPFTHGCWSFMHNGQVGGFENFRRRADMIIPDELYSARKGATDSEALFLIAIAEGLYEDPK
GAMQRAVGRLEALSREFGHTPHMRIGAAFSCGGALYAVRYASDHLAPTVYSSKSADGTGRLVVSEPLHKGECWEAVPAGS
FCRFTADDTEIEDFVPQF

Specific function: Unknown

COG id: COG0121

COG function: function code R; Predicted glutamine amidotransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutamine amidotransferase type-2 domain [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6324138, Length=290, Percent_Identity=31.3793103448276, Blast_Score=117, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017808
- InterPro:   IPR017932 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28453; Mature: 28453

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCRWAAYIGPPVHLDEVVCKPEHSLVAQSVHAFECKTQTNADGFGIAWYDSREEPGLYRD
CCEECCCCCCCCCHHHHHCCCCHHHHHHHHHHHEECCCCCCCCCEEEEECCCCCCCCCCC
THPAWSDPNLKSITHQVRSGLFLAHVRASTGTATSRNNCHPFTHGCWSFMHNGQVGGFEN
CCCCCCCCCHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHH
FRRRADMIIPDELYSARKGATDSEALFLIAIAEGLYEDPKGAMQRAVGRLEALSREFGHT
HHHHCCCCCCHHHHHHHCCCCCCCCEEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHCCC
PHMRIGAAFSCGGALYAVRYASDHLAPTVYSSKSADGTGRLVVSEPLHKGECWEAVPAGS
CCEEECCEEECCCEEEEEEECCCCCCCEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCC
FCRFTADDTEIEDFVPQF
EEEECCCCCHHHHHCCCC
>Mature Secondary Structure
MCRWAAYIGPPVHLDEVVCKPEHSLVAQSVHAFECKTQTNADGFGIAWYDSREEPGLYRD
CCEECCCCCCCCCHHHHHCCCCHHHHHHHHHHHEECCCCCCCCCEEEEECCCCCCCCCCC
THPAWSDPNLKSITHQVRSGLFLAHVRASTGTATSRNNCHPFTHGCWSFMHNGQVGGFEN
CCCCCCCCCHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHH
FRRRADMIIPDELYSARKGATDSEALFLIAIAEGLYEDPKGAMQRAVGRLEALSREFGHT
HHHHCCCCCCHHHHHHHCCCCCCCCEEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHCCC
PHMRIGAAFSCGGALYAVRYASDHLAPTVYSSKSADGTGRLVVSEPLHKGECWEAVPAGS
CCEEECCEEECCCEEEEEEECCCCCCCEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCC
FCRFTADDTEIEDFVPQF
EEEECCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]