| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99081072
Identifier: 99081072
GI number: 99081072
Start: 1326112
End: 1326660
Strand: Direct
Name: 99081072
Synonym: TM1040_1231
Alternate gene names: NA
Gene position: 1326112-1326660 (Clockwise)
Preceding gene: 99081071
Following gene: 99081073
Centisome position: 41.43
GC content: 59.93
Gene sequence:
>549_bases ATGCACGTCACCGCTGAGGAACTTGATGCGGCGCTGCCGCATGTGATGGCCGCCCCGAAGGATCGGGCGGCCATTTCCAT GTTGTGCCTGCGTCCCGGCTATAATCAGCGCCACTTTGTGGATGAGATTACTGTCACCCCCGAGGGCGGCATTCCCGGCG AACGCTGGTCGAGCCGACCTTGGCTGCAATTGGACGACGGCAGCGCCCATCCGGGCATTCAGGTCTGCATCCTGTCAAAG CGGGTGCTGGATCTGGTCTGGCGTCACCGGGAAGAGGTGCCCCATCCGGGCGATACGTTTATCGTCGATATGGATCTGTC CGAAGAAAACCTCCCCGTGGGGCAGCTGCTGCAGGTGGGTAGCGCGCTGTTGCGGGTGTCGGATGTGTTCAACGATGGCT GCGTAAAGTGGAAAACCCGCTATGGTGTCGCGGCAAAGGATTGGGTGAACCGGCCAGAAAACCGCGCATTGCGGCTGCGC GGAATTCTCTGTTCCGTCGCGCAGGCTGGACGCTTTCAATCCGGGGATCTTATGATCAAAAAACAGTGA
Upstream 100 bases:
>100_bases TCGCACTGGAGATCGAAGACAAGATCCGCGCTGCGCATGGGCTTGATTTCGACATGCCCCCCGAAGCGCAAGACGACGAT GTTCTGTTTGAAGGCTGACG
Downstream 100 bases:
>100_bases CCAACCCCACTGTTTTCCTTGGGAATATGCGCCAGGCAACTTGGGCGGTGGACAGCCCTGCATGGGCGCGATAAACCGCT TTGGACTGTTCCAATCACAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MHVTAEELDAALPHVMAAPKDRAAISMLCLRPGYNQRHFVDEITVTPEGGIPGERWSSRPWLQLDDGSAHPGIQVCILSK RVLDLVWRHREEVPHPGDTFIVDMDLSEENLPVGQLLQVGSALLRVSDVFNDGCVKWKTRYGVAAKDWVNRPENRALRLR GILCSVAQAGRFQSGDLMIKKQ
Sequences:
>Translated_182_residues MHVTAEELDAALPHVMAAPKDRAAISMLCLRPGYNQRHFVDEITVTPEGGIPGERWSSRPWLQLDDGSAHPGIQVCILSK RVLDLVWRHREEVPHPGDTFIVDMDLSEENLPVGQLLQVGSALLRVSDVFNDGCVKWKTRYGVAAKDWVNRPENRALRLR GILCSVAQAGRFQSGDLMIKKQ >Mature_182_residues MHVTAEELDAALPHVMAAPKDRAAISMLCLRPGYNQRHFVDEITVTPEGGIPGERWSSRPWLQLDDGSAHPGIQVCILSK RVLDLVWRHREEVPHPGDTFIVDMDLSEENLPVGQLLQVGSALLRVSDVFNDGCVKWKTRYGVAAKDWVNRPENRALRLR GILCSVAQAGRFQSGDLMIKKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20358; Mature: 20358
Theoretical pI: Translated: 7.11; Mature: 7.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHVTAEELDAALPHVMAAPKDRAAISMLCLRPGYNQRHFVDEITVTPEGGIPGERWSSRP CCCCHHHHHHHHHHHHCCCCCHHHEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCC WLQLDDGSAHPGIQVCILSKRVLDLVWRHREEVPHPGDTFIVDMDLSEENLPVGQLLQVG CEEECCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHH SALLRVSDVFNDGCVKWKTRYGVAAKDWVNRPENRALRLRGILCSVAQAGRFQSGDLMIK HHHHHHHHHHCCCCEEEECCCCCCHHHHHCCCCCCEEHHHHHHHHHHHCCCCCCCCEEEE KQ EC >Mature Secondary Structure MHVTAEELDAALPHVMAAPKDRAAISMLCLRPGYNQRHFVDEITVTPEGGIPGERWSSRP CCCCHHHHHHHHHHHHCCCCCHHHEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCC WLQLDDGSAHPGIQVCILSKRVLDLVWRHREEVPHPGDTFIVDMDLSEENLPVGQLLQVG CEEECCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHH SALLRVSDVFNDGCVKWKTRYGVAAKDWVNRPENRALRLRGILCSVAQAGRFQSGDLMIK HHHHHHHHHHCCCCEEEECCCCCCHHHHHCCCCCCEEHHHHHHHHHHHCCCCCCCCEEEE KQ EC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA