| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99081070
Identifier: 99081070
GI number: 99081070
Start: 1324244
End: 1324903
Strand: Reverse
Name: 99081070
Synonym: TM1040_1229
Alternate gene names: NA
Gene position: 1324903-1324244 (Counterclockwise)
Preceding gene: 99081076
Following gene: 99081065
Centisome position: 41.39
GC content: 55.76
Gene sequence:
>660_bases GTGTGGTTAAGGATAGGTTTACAAAGCGAAGACAGTTTGAACTATTGCCGGAGCTTTAACGTCATGATGGTATTTTACTG CGCGCGGCTGGTGCTGCTTTCGGTGCCCAAGACCGGCACAACCGCCCTGCAGAGCGCGCTGAGGCCTCATGCCGATCTGG TGATTTCCGACCCGCCAGAGCTCAAACATGCGCCGCTCTATCGCTACAATCGCTGGATCCGTCCGATGTTTGAGAAGGTC TGCGATGCCGAACTCGAAGTCGCCGCCATCATGCGCGAGCCGATCAGCTGGCTCGGCAGCTGGTACCGGTTTCGCCAACG TCCGCATCTGGACGGGCAGCCCGCATCAACCAAAGACCTCAGCTTTGATGAATTCGTGACTGACTATTGCCGCGGCAAAC GACCCGCTCATGCCAATGTAGGAAGTCAGGCCAAGTTCCTGGAATCTCAGCCAAATGGCTGTCGTGTGACGCATCTCTTC GCCTATGAAGACCTCGCGCCCTTTCACGCCTTTTTGAGGGATCGTACGGGCCTCAGTTATGAAACGCAGCCGGAAAATGT GAGCCCCAAGGGCGATCTAACACTTTCAGCCGCCACGGAGCAGAAATTCAGGCGCAAACACCCTGAGGAGTTTGAGCTCT ATCAATCGATCACCACCTGA
Upstream 100 bases:
>100_bases GGAGGCGGACGACAATGACTGCTTTGTTCTCCTCTTGTTCCTTATGAGGTCAAAACAAGAACATTGCAAGATGATTTCCA GTTCGTTTACGGGACTGGCA
Downstream 100 bases:
>100_bases ATCAGGCACGCCGCACAACGCGGAGCTTGCTTACTGAAGTTGAGACTGAACGGTTTCCGTGAGCTGCGAGAGCGAGAACG GTTTGGCCAGGAAGACCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 219; Mature: 219
Protein sequence:
>219_residues MWLRIGLQSEDSLNYCRSFNVMMVFYCARLVLLSVPKTGTTALQSALRPHADLVISDPPELKHAPLYRYNRWIRPMFEKV CDAELEVAAIMREPISWLGSWYRFRQRPHLDGQPASTKDLSFDEFVTDYCRGKRPAHANVGSQAKFLESQPNGCRVTHLF AYEDLAPFHAFLRDRTGLSYETQPENVSPKGDLTLSAATEQKFRRKHPEEFELYQSITT
Sequences:
>Translated_219_residues MWLRIGLQSEDSLNYCRSFNVMMVFYCARLVLLSVPKTGTTALQSALRPHADLVISDPPELKHAPLYRYNRWIRPMFEKV CDAELEVAAIMREPISWLGSWYRFRQRPHLDGQPASTKDLSFDEFVTDYCRGKRPAHANVGSQAKFLESQPNGCRVTHLF AYEDLAPFHAFLRDRTGLSYETQPENVSPKGDLTLSAATEQKFRRKHPEEFELYQSITT >Mature_219_residues MWLRIGLQSEDSLNYCRSFNVMMVFYCARLVLLSVPKTGTTALQSALRPHADLVISDPPELKHAPLYRYNRWIRPMFEKV CDAELEVAAIMREPISWLGSWYRFRQRPHLDGQPASTKDLSFDEFVTDYCRGKRPAHANVGSQAKFLESQPNGCRVTHLF AYEDLAPFHAFLRDRTGLSYETQPENVSPKGDLTLSAATEQKFRRKHPEEFELYQSITT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25292; Mature: 25292
Theoretical pI: Translated: 7.91; Mature: 7.91
Prosite motif: PS00021 KRINGLE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWLRIGLQSEDSLNYCRSFNVMMVFYCARLVLLSVPKTGTTALQSALRPHADLVISDPPE CEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEECCCCC LKHAPLYRYNRWIRPMFEKVCDAELEVAAIMREPISWLGSWYRFRQRPHLDGQPASTKDL CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC SFDEFVTDYCRGKRPAHANVGSQAKFLESQPNGCRVTHLFAYEDLAPFHAFLRDRTGLSY CHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHCCCCCC ETQPENVSPKGDLTLSAATEQKFRRKHPEEFELYQSITT CCCCCCCCCCCCEEEEHHHHHHHHHCCCHHHHHHHHHCC >Mature Secondary Structure MWLRIGLQSEDSLNYCRSFNVMMVFYCARLVLLSVPKTGTTALQSALRPHADLVISDPPE CEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEECCCCC LKHAPLYRYNRWIRPMFEKVCDAELEVAAIMREPISWLGSWYRFRQRPHLDGQPASTKDL CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC SFDEFVTDYCRGKRPAHANVGSQAKFLESQPNGCRVTHLFAYEDLAPFHAFLRDRTGLSY CHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHCCCCCC ETQPENVSPKGDLTLSAATEQKFRRKHPEEFELYQSITT CCCCCCCCCCCCEEEEHHHHHHHHHCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA