| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is guaB [H]
Identifier: 99081065
GI number: 99081065
Start: 1315559
End: 1317007
Strand: Reverse
Name: guaB [H]
Synonym: TM1040_1224
Alternate gene names: 99081065
Gene position: 1317007-1315559 (Counterclockwise)
Preceding gene: 99081070
Following gene: 99081063
Centisome position: 41.14
GC content: 62.18
Gene sequence:
>1449_bases ATGCAGATTCGTGAGGCTCTCACCTTTGACGATGTTTTGCTGGTTCCGGCCGCATCCAGTGTACTGCCAAATACGGCGGA CACGCGCACGCGGGTGACCCGTGCTATCTCGCTCAATATCCCGCTGCTGAGTTCGGCAATGGACACGGTCACGGAATCGC GCATGGCGATTACCATGGCGCAGGCCGGTGGCATGGGCGTGATCCACAAGAACCTCGACATCGAGGAGCAGGCCCGTCAG GTGCGTCGCGTGAAGCGTTTCGAGAGCGGCATCGTCTACAACCCCATCACCCTGCGCGCCGACCAGACGCTGGCAGATGC CAAGGCACTGCAAGAACGCTATCGCGTCACCGGGTTCCCGGTTGTGGATGACAGTGGCCGTGTCGTCGGGATCGTGACCA ACCGCGACATGCGCTTTGCCTCCGATGACAAGACGCCGGTTTCGGTGATGATGACCTCTGACAATCTTGCAATGCTGCAA GAACCGGCAGAACGCGACGAGGCGATCTCTTTGATGAAGGCGCGGCGGATCGAGAAGCTGCTCGTGACCGACAAGGACGG CAAGCTGACGGGCCTCTTGACCCTCAAGGACACCGAACAGGCCGTCCTGAACCCGACAGCGGTGAAAGACGACCTGGGCC GCCTTCGTGTTGCAGCAGCAAGCTCCGTCGGGGATAGCGGGTTCGAGCGTTCCGAGGCGTTGATTGATGCGGGCGTCGAC GTGGTTGTGGTCGATACAGCCCACGGCCATTCCGCTGGCGTGATCGAAGCCGTGACACGCATCAAGGCGCTATCGAGCGA TGTTCAGGTCATCGCAGGCAACGTCGCCACCGCGGCCGCAACACGGGCGCTCATCGATGCGGGCGCGGATGCGGTCAAGG TCGGCATTGGTCCGGGCTCCATCTGCACCACCCGCATGGTGGCCGGCGTCGGCGTGCCTCAGCTGACGGCCATCATGGAT TGCGCAAGCGCTGCGGGCGATACGCCTGTAATTGCAGATGGTGGCATCAAGTTCTCTGGTGACTTTGCCAAGGCCATCGC CGCCGGCGCCTCCTGCGCCATGGTGGGGTCGATGATTGCGGGCACCGACGAGTCGCCCGGCGAAGTCATTCTCTACCAAG GCCGCTCTTTCAAATCCTATCGCGGCATGGGCTCCATGGGTGCGATGGCGCGCGGGTCTGCGGATCGCTATTTCCAGAAA GACGCTGCCAGCGACAAGCTGGTGCCCGAAGGTATCGAAGGCCAGGTTCCGTATAAGGGCGCCGCTGGCGCAGTGATCCA CCAGCTCGTCGGCGGCCTGCGTGCAGCCATGGGCTATACCGGCTGCGCCACTGTCGATGACATGCGCACCTCTTGTGAAT TTGTTCGCATCACGGGCGCAGGCCTCAAAGAGAGCCATGTGCACGATGTGCAGATCACCCGCGAATCCCCGAACTACCGG ATCGGCTGA
Upstream 100 bases:
>100_bases GCCGCCGCGATGCGGCGAAAAATGTCGCGCCCCCCTTCCCCCTTTCGCGGAACTGTGCAATAGGGTCACCGCCAAACGGT GTTTTGCATGGGGAAGACAG
Downstream 100 bases:
>100_bases TCACTCCAAATCACAGACAAAGAAAGAGCCGGAACCCACTGAGGTTCCGGCTCTTTTTACATCAGCGCCCCTTGAAGAGC CCGCCCAGAATCCCGCGAAC
Product: inosine-5'-monophosphate dehydrogenase
Products: NA
Alternate protein names: IMP dehydrogenase; IMPD; IMPDH [H]
Number of amino acids: Translated: 482; Mature: 482
Protein sequence:
>482_residues MQIREALTFDDVLLVPAASSVLPNTADTRTRVTRAISLNIPLLSSAMDTVTESRMAITMAQAGGMGVIHKNLDIEEQARQ VRRVKRFESGIVYNPITLRADQTLADAKALQERYRVTGFPVVDDSGRVVGIVTNRDMRFASDDKTPVSVMMTSDNLAMLQ EPAERDEAISLMKARRIEKLLVTDKDGKLTGLLTLKDTEQAVLNPTAVKDDLGRLRVAAASSVGDSGFERSEALIDAGVD VVVVDTAHGHSAGVIEAVTRIKALSSDVQVIAGNVATAAATRALIDAGADAVKVGIGPGSICTTRMVAGVGVPQLTAIMD CASAAGDTPVIADGGIKFSGDFAKAIAAGASCAMVGSMIAGTDESPGEVILYQGRSFKSYRGMGSMGAMARGSADRYFQK DAASDKLVPEGIEGQVPYKGAAGAVIHQLVGGLRAAMGYTGCATVDDMRTSCEFVRITGAGLKESHVHDVQITRESPNYR IG
Sequences:
>Translated_482_residues MQIREALTFDDVLLVPAASSVLPNTADTRTRVTRAISLNIPLLSSAMDTVTESRMAITMAQAGGMGVIHKNLDIEEQARQ VRRVKRFESGIVYNPITLRADQTLADAKALQERYRVTGFPVVDDSGRVVGIVTNRDMRFASDDKTPVSVMMTSDNLAMLQ EPAERDEAISLMKARRIEKLLVTDKDGKLTGLLTLKDTEQAVLNPTAVKDDLGRLRVAAASSVGDSGFERSEALIDAGVD VVVVDTAHGHSAGVIEAVTRIKALSSDVQVIAGNVATAAATRALIDAGADAVKVGIGPGSICTTRMVAGVGVPQLTAIMD CASAAGDTPVIADGGIKFSGDFAKAIAAGASCAMVGSMIAGTDESPGEVILYQGRSFKSYRGMGSMGAMARGSADRYFQK DAASDKLVPEGIEGQVPYKGAAGAVIHQLVGGLRAAMGYTGCATVDDMRTSCEFVRITGAGLKESHVHDVQITRESPNYR IG >Mature_482_residues MQIREALTFDDVLLVPAASSVLPNTADTRTRVTRAISLNIPLLSSAMDTVTESRMAITMAQAGGMGVIHKNLDIEEQARQ VRRVKRFESGIVYNPITLRADQTLADAKALQERYRVTGFPVVDDSGRVVGIVTNRDMRFASDDKTPVSVMMTSDNLAMLQ EPAERDEAISLMKARRIEKLLVTDKDGKLTGLLTLKDTEQAVLNPTAVKDDLGRLRVAAASSVGDSGFERSEALIDAGVD VVVVDTAHGHSAGVIEAVTRIKALSSDVQVIAGNVATAAATRALIDAGADAVKVGIGPGSICTTRMVAGVGVPQLTAIMD CASAAGDTPVIADGGIKFSGDFAKAIAAGASCAMVGSMIAGTDESPGEVILYQGRSFKSYRGMGSMGAMARGSADRYFQK DAASDKLVPEGIEGQVPYKGAAGAVIHQLVGGLRAAMGYTGCATVDDMRTSCEFVRITGAGLKESHVHDVQITRESPNYR IG
Specific function: GMP biosynthesis from IMP; first step. [C]
COG id: COG0516
COG function: function code F; IMP dehydrogenase/GMP reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
Organism=Homo sapiens, GI66933016, Length=483, Percent_Identity=35.4037267080745, Blast_Score=273, Evalue=2e-73, Organism=Homo sapiens, GI217035146, Length=457, Percent_Identity=36.5426695842451, Blast_Score=270, Evalue=2e-72, Organism=Homo sapiens, GI156616279, Length=457, Percent_Identity=36.5426695842451, Blast_Score=270, Evalue=3e-72, Organism=Homo sapiens, GI34328930, Length=483, Percent_Identity=35.6107660455487, Blast_Score=270, Evalue=3e-72, Organism=Homo sapiens, GI34328928, Length=457, Percent_Identity=36.5426695842451, Blast_Score=269, Evalue=4e-72, Organism=Homo sapiens, GI217035152, Length=451, Percent_Identity=36.5853658536585, Blast_Score=263, Evalue=2e-70, Organism=Homo sapiens, GI217035148, Length=457, Percent_Identity=35.6673960612691, Blast_Score=256, Evalue=4e-68, Organism=Homo sapiens, GI217035150, Length=457, Percent_Identity=33.6980306345733, Blast_Score=231, Evalue=1e-60, Organism=Homo sapiens, GI50541956, Length=247, Percent_Identity=38.4615384615385, Blast_Score=165, Evalue=7e-41, Organism=Homo sapiens, GI50541954, Length=247, Percent_Identity=38.4615384615385, Blast_Score=165, Evalue=7e-41, Organism=Homo sapiens, GI50541952, Length=247, Percent_Identity=38.4615384615385, Blast_Score=165, Evalue=7e-41, Organism=Homo sapiens, GI50541948, Length=247, Percent_Identity=38.4615384615385, Blast_Score=165, Evalue=7e-41, Organism=Homo sapiens, GI156104880, Length=247, Percent_Identity=36.8421052631579, Blast_Score=157, Evalue=2e-38, Organism=Escherichia coli, GI1788855, Length=482, Percent_Identity=60.1659751037344, Blast_Score=551, Evalue=1e-158, Organism=Escherichia coli, GI1786293, Length=267, Percent_Identity=35.2059925093633, Blast_Score=150, Evalue=2e-37, Organism=Caenorhabditis elegans, GI71994385, Length=479, Percent_Identity=36.9519832985386, Blast_Score=257, Evalue=1e-68, Organism=Caenorhabditis elegans, GI71994389, Length=427, Percent_Identity=38.4074941451991, Blast_Score=245, Evalue=3e-65, Organism=Caenorhabditis elegans, GI17560440, Length=283, Percent_Identity=33.5689045936396, Blast_Score=163, Evalue=2e-40, Organism=Saccharomyces cerevisiae, GI6322012, Length=489, Percent_Identity=37.0143149284254, Blast_Score=297, Evalue=3e-81, Organism=Saccharomyces cerevisiae, GI6323585, Length=485, Percent_Identity=35.8762886597938, Blast_Score=296, Evalue=5e-81, Organism=Saccharomyces cerevisiae, GI6323464, Length=493, Percent_Identity=36.9168356997972, Blast_Score=288, Evalue=1e-78, Organism=Saccharomyces cerevisiae, GI6319352, Length=344, Percent_Identity=38.0813953488372, Blast_Score=224, Evalue=3e-59, Organism=Saccharomyces cerevisiae, GI6319353, Length=117, Percent_Identity=38.4615384615385, Blast_Score=73, Evalue=1e-13, Organism=Drosophila melanogaster, GI24641071, Length=484, Percent_Identity=34.7107438016529, Blast_Score=277, Evalue=1e-74, Organism=Drosophila melanogaster, GI24641073, Length=484, Percent_Identity=34.7107438016529, Blast_Score=277, Evalue=1e-74, Organism=Drosophila melanogaster, GI28571163, Length=438, Percent_Identity=35.1598173515982, Blast_Score=248, Evalue=6e-66,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR005990 - InterPro: IPR018529 - InterPro: IPR015875 - InterPro: IPR001093 [H]
Pfam domain/function: PF00571 CBS; PF00478 IMPDH [H]
EC number: =1.1.1.205 [H]
Molecular weight: Translated: 50636; Mature: 50636
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: PS00487 IMP_DH_GMP_RED
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIREALTFDDVLLVPAASSVLPNTADTRTRVTRAISLNIPLLSSAMDTVTESRMAITMA CCHHHHCCCCCEEEECCCHHHCCCCCCHHHHEEEEEEECCCHHHHHHHHHHHHHEEEEEE QAGGMGVIHKNLDIEEQARQVRRVKRFESGIVYNPITLRADQTLADAKALQERYRVTGFP CCCCCEEEECCCCHHHHHHHHHHHHHHHCCCEECCEEEECCCHHHHHHHHHHHHCCCCCE VVDDSGRVVGIVTNRDMRFASDDKTPVSVMMTSDNLAMLQEPAERDEAISLMKARRIEKL EECCCCCEEEEEECCCCEECCCCCCCEEEEEECCCHHHHCCCHHHHHHHHHHHHHHHHHH LVTDKDGKLTGLLTLKDTEQAVLNPTAVKDDLGRLRVAAASSVGDSGFERSEALIDAGVD EEECCCCCEEEEEEECCCCHHHCCCHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHCCCC VVVVDTAHGHSAGVIEAVTRIKALSSDVQVIAGNVATAAATRALIDAGADAVKVGIGPGS EEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCCEEEEECCCCC ICTTRMVAGVGVPQLTAIMDCASAAGDTPVIADGGIKFSGDFAKAIAAGASCAMVGSMIA HHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEECCCEEECCHHHHHHHCCCHHHHHHHHHC GTDESPGEVILYQGRSFKSYRGMGSMGAMARGSADRYFQKDAASDKLVPEGIEGQVPYKG CCCCCCCCEEEECCCCCHHHCCCCCCCCHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCC AAGAVIHQLVGGLRAAMGYTGCATVDDMRTSCEFVRITGAGLKESHVHDVQITRESPNYR CHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCEEEEEECCCCCCCCCEEEEEEECCCCCC IG CC >Mature Secondary Structure MQIREALTFDDVLLVPAASSVLPNTADTRTRVTRAISLNIPLLSSAMDTVTESRMAITMA CCHHHHCCCCCEEEECCCHHHCCCCCCHHHHEEEEEEECCCHHHHHHHHHHHHHEEEEEE QAGGMGVIHKNLDIEEQARQVRRVKRFESGIVYNPITLRADQTLADAKALQERYRVTGFP CCCCCEEEECCCCHHHHHHHHHHHHHHHCCCEECCEEEECCCHHHHHHHHHHHHCCCCCE VVDDSGRVVGIVTNRDMRFASDDKTPVSVMMTSDNLAMLQEPAERDEAISLMKARRIEKL EECCCCCEEEEEECCCCEECCCCCCCEEEEEECCCHHHHCCCHHHHHHHHHHHHHHHHHH LVTDKDGKLTGLLTLKDTEQAVLNPTAVKDDLGRLRVAAASSVGDSGFERSEALIDAGVD EEECCCCCEEEEEEECCCCHHHCCCHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHCCCC VVVVDTAHGHSAGVIEAVTRIKALSSDVQVIAGNVATAAATRALIDAGADAVKVGIGPGS EEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCCEEEEECCCCC ICTTRMVAGVGVPQLTAIMDCASAAGDTPVIADGGIKFSGDFAKAIAAGASCAMVGSMIA HHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEECCCEEECCHHHHHHHCCCHHHHHHHHHC GTDESPGEVILYQGRSFKSYRGMGSMGAMARGSADRYFQKDAASDKLVPEGIEGQVPYKG CCCCCCCCEEEECCCCCHHHCCCCCCCCHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCC AAGAVIHQLVGGLRAAMGYTGCATVDDMRTSCEFVRITGAGLKESHVHDVQITRESPNYR CHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCEEEEEECCCCCCCCCEEEEEEECCCCCC IG CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]