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The map label for this gene is ycbK [H]

Identifier: 99081058

GI number: 99081058

Start: 1307375

End: 1307941

Strand: Reverse

Name: ycbK [H]

Synonym: TM1040_1217

Alternate gene names: 99081058

Gene position: 1307941-1307375 (Counterclockwise)

Preceding gene: 99081063

Following gene: 99081057

Centisome position: 40.86

GC content: 59.26

Gene sequence:

>567_bases
ATGACAGAAAAAACTACCGGGTTATCCCGTCGAGCACTCCTAAAGGCATTTGCGGCCACAACAGTCGCAGCAGCCCCAAC
CTACACACAGGCAGCCGGCTTCCTCCGTGGAGGGGGCGACATCCGGCGCATTCGTATGTACTCCGGTCGCACAGGCGAGC
GCTTGGACATGATCTATTGGATCGATGGCAAGTACATCAAGGACGCGGTGAAAGAGATCAATCACTTCATGCGCGACTGG
CGCAATGATCAGGTCAAGGCGATCGACCTGCGCACAATTGACATCATGGCGGCCTCGTCGAACCTTCTTGAAGTGAACGA
ACCCTACCTGCTGCTCTCCGGCTACCGGAGCCCGCAGACCAATGCGATGCTGCGCAGCCGCTCGCGTGGTGTGGCCAAGA
ACTCGCTTCACATGAAGGGTCAGGCTGCAGACCTGCGTCTGTCTACCCGTACAGTCAGCCAGATGGCGCAAGCCGCTCAG
GCCTGCAAAGCGGGTGGCGTCGGGCGCTACTATGGCTCGAACTTCGTACACATGGACTGCGGCGTGGTCCGTAGCTGGCG
CGGCTAA

Upstream 100 bases:

>100_bases
GATTCTCGCTGTGCCATACAGTTCTCGCGCGAAATAGCGCAAATTTCCCGAAACTTCGGGACGTGTGAAAACAAAAGCGT
ATGGGACAACGCTCATCACG

Downstream 100 bases:

>100_bases
CAGCGCCCCATCCGATTGCAATCGGAGCCTCGCTGCACGCGCAGCGTGGTCCTGAACCTGTGTCAGGCATGACAGGGCCC
TGCCCAAGCTCTCACATGTC

Product: twin-arginine translocation pathway signal

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 187

Protein sequence:

>188_residues
MTEKTTGLSRRALLKAFAATTVAAAPTYTQAAGFLRGGGDIRRIRMYSGRTGERLDMIYWIDGKYIKDAVKEINHFMRDW
RNDQVKAIDLRTIDIMAASSNLLEVNEPYLLLSGYRSPQTNAMLRSRSRGVAKNSLHMKGQAADLRLSTRTVSQMAQAAQ
ACKAGGVGRYYGSNFVHMDCGVVRSWRG

Sequences:

>Translated_188_residues
MTEKTTGLSRRALLKAFAATTVAAAPTYTQAAGFLRGGGDIRRIRMYSGRTGERLDMIYWIDGKYIKDAVKEINHFMRDW
RNDQVKAIDLRTIDIMAASSNLLEVNEPYLLLSGYRSPQTNAMLRSRSRGVAKNSLHMKGQAADLRLSTRTVSQMAQAAQ
ACKAGGVGRYYGSNFVHMDCGVVRSWRG
>Mature_187_residues
TEKTTGLSRRALLKAFAATTVAAAPTYTQAAGFLRGGGDIRRIRMYSGRTGERLDMIYWIDGKYIKDAVKEINHFMRDWR
NDQVKAIDLRTIDIMAASSNLLEVNEPYLLLSGYRSPQTNAMLRSRSRGVAKNSLHMKGQAADLRLSTRTVSQMAQAAQA
CKAGGVGRYYGSNFVHMDCGVVRSWRG

Specific function: Unknown

COG id: COG3108

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1666 [H]

Homologues:

Organism=Escherichia coli, GI1787157, Length=136, Percent_Identity=44.1176470588235, Blast_Score=119, Evalue=8e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010275
- InterPro:   IPR009045
- InterPro:   IPR006311 [H]

Pfam domain/function: PF05951 Peptidase_M15_2 [H]

EC number: NA

Molecular weight: Translated: 20916; Mature: 20785

Theoretical pI: Translated: 10.74; Mature: 10.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEKTTGLSRRALLKAFAATTVAAAPTYTQAAGFLRGGGDIRRIRMYSGRTGERLDMIYW
CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEEE
IDGKYIKDAVKEINHFMRDWRNDQVKAIDLRTIDIMAASSNLLEVNEPYLLLSGYRSPQT
ECCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCCCEEECCCCEEEEECCCCCCH
NAMLRSRSRGVAKNSLHMKGQAADLRLSTRTVSQMAQAAQACKAGGVGRYYGSNFVHMDC
HHHHHHHCCCCCCCCEECCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECC
GVVRSWRG
CCCCCCCC
>Mature Secondary Structure 
TEKTTGLSRRALLKAFAATTVAAAPTYTQAAGFLRGGGDIRRIRMYSGRTGERLDMIYW
CCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEEE
IDGKYIKDAVKEINHFMRDWRNDQVKAIDLRTIDIMAASSNLLEVNEPYLLLSGYRSPQT
ECCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCCCEEECCCCEEEEECCCCCCH
NAMLRSRSRGVAKNSLHMKGQAADLRLSTRTVSQMAQAAQACKAGGVGRYYGSNFVHMDC
HHHHHHHCCCCCCCCEECCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECC
GVVRSWRG
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]