| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is plsC [H]
Identifier: 99081050
GI number: 99081050
Start: 1298052
End: 1298912
Strand: Direct
Name: plsC [H]
Synonym: TM1040_1209
Alternate gene names: 99081050
Gene position: 1298052-1298912 (Clockwise)
Preceding gene: 99081049
Following gene: 99081051
Centisome position: 40.55
GC content: 60.86
Gene sequence:
>861_bases ATGAGTGTCAGCTGGCAGAGCGAGACGCCCCCCGAGAAGACCCGGATCACGGCGCTTGGTTGGGGCAGGGTGGTGCTGCG GGGCAGTGCGCTTGCGGTGCTTGTTTTTGGCTGTCTGGCGCTGTTGCTGATGGTCCGTCTCGTTGAGCGCCCGCTTTTTG GGGTTCAGAGACCGCTGACGCCGTTCATCACCGTGTTTGTGTGCCGCAACGCCTTTCGCATTCTTGGCATGCGGTTTCAC ACCCGTGGCCGCAGCATGCGCGCACCGGGAATTGTGGTGGCGAACCATTCGTCCTGGCTCGACATTTTTGCGCTGAACGC CAAGAAGCGGATTTATTTTGTTTCAAAGTCCGAGGTCGCGGGCTGGCCCGGCATCGGCTGGCTGGCGCGGGCGACGGGGA CCGTGTTCATCGAACGCAACCGAGCCAAGGCCCAAGAGCAAAAGGCGCTGTTTGCCGCACGCCTCAAGGCCGGGCACAAG CTGTTGTTTTTTCCCGAAGGCACCTCTACCGACGGGCTGAGGGTCTTGCCGTTCAAGACCACGCTGTTTGCCTCCCTCTT TGAAGATGATCTGCGTGAAGAGATGCATGTGCAGCCTGTCTCGGTTGTCTTTGATGCCCCCAAAGGCGCCGAGCGCCGGT TTTATGGCTGGTGGGGCGACATGGACTTTGGCTCGCATCTTCTAAAAGTGCTTGCGGCGCAGCCACAGGGCGGGGTGGAG ATCCTTTATCATCCGCCGGTTCGGGTGGCGGATTTTGCCGATCGCAAGGCGTTGGCGGCCTATTGCGAAGAAGTGGTGCG CGACGGACATGCCTCTGCGCTGCCTCTGGTGGTCGACGCGGTAGCCAAAGATCACCCCTGA
Upstream 100 bases:
>100_bases TGGATCATGATTTCAACACCACGGATGTCTGTCTGATCCTCGACACCGCGCGCATGAACGCGCGCCAGAAGAGCATCTAT ACCCGCGGAACCGCCTCTGC
Downstream 100 bases:
>100_bases GCCGTGCGCTTTTGCGCTTGCGCAACAGGAAAACCTGCCTTATACGCGCTCCATCGAACCCGCAGGCGGGGTTTGGCCTG TTCAGGGGAGACATCCCTGA
Product: lyso-ornithine lipid acyltransferase
Products: NA
Alternate protein names: 1-AGP acyltransferase; 1-AGPAT; Lysophosphatidic acid acyltransferase; LPAAT [H]
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MSVSWQSETPPEKTRITALGWGRVVLRGSALAVLVFGCLALLLMVRLVERPLFGVQRPLTPFITVFVCRNAFRILGMRFH TRGRSMRAPGIVVANHSSWLDIFALNAKKRIYFVSKSEVAGWPGIGWLARATGTVFIERNRAKAQEQKALFAARLKAGHK LLFFPEGTSTDGLRVLPFKTTLFASLFEDDLREEMHVQPVSVVFDAPKGAERRFYGWWGDMDFGSHLLKVLAAQPQGGVE ILYHPPVRVADFADRKALAAYCEEVVRDGHASALPLVVDAVAKDHP
Sequences:
>Translated_286_residues MSVSWQSETPPEKTRITALGWGRVVLRGSALAVLVFGCLALLLMVRLVERPLFGVQRPLTPFITVFVCRNAFRILGMRFH TRGRSMRAPGIVVANHSSWLDIFALNAKKRIYFVSKSEVAGWPGIGWLARATGTVFIERNRAKAQEQKALFAARLKAGHK LLFFPEGTSTDGLRVLPFKTTLFASLFEDDLREEMHVQPVSVVFDAPKGAERRFYGWWGDMDFGSHLLKVLAAQPQGGVE ILYHPPVRVADFADRKALAAYCEEVVRDGHASALPLVVDAVAKDHP >Mature_285_residues SVSWQSETPPEKTRITALGWGRVVLRGSALAVLVFGCLALLLMVRLVERPLFGVQRPLTPFITVFVCRNAFRILGMRFHT RGRSMRAPGIVVANHSSWLDIFALNAKKRIYFVSKSEVAGWPGIGWLARATGTVFIERNRAKAQEQKALFAARLKAGHKL LFFPEGTSTDGLRVLPFKTTLFASLFEDDLREEMHVQPVSVVFDAPKGAERRFYGWWGDMDFGSHLLKVLAAQPQGGVEI LYHPPVRVADFADRKALAAYCEEVVRDGHASALPLVVDAVAKDHP
Specific function: Converts lysophosphatidic acid (LPA) into phosphatidic acid by incorporating acyl moiety at the 2 position [H]
COG id: COG0204
COG function: function code I; 1-acyl-sn-glycerol-3-phosphate acyltransferase
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002123 - InterPro: IPR004552 [H]
Pfam domain/function: PF01553 Acyltransferase [H]
EC number: =2.3.1.51 [H]
Molecular weight: Translated: 31838; Mature: 31707
Theoretical pI: Translated: 10.46; Mature: 10.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVSWQSETPPEKTRITALGWGRVVLRGSALAVLVFGCLALLLMVRLVERPLFGVQRPLT CCCCCCCCCCCCHHEEEEEECCEEEEECCHHHHHHHHHHHHHHHHHHHHCHHHHCCCCHH PFITVFVCRNAFRILGMRFHTRGRSMRAPGIVVANHSSWLDIFALNAKKRIYFVSKSEVA HHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEEECCCCEEEEEEECCCEEEEEEECCCCC GWPGIGWLARATGTVFIERNRAKAQEQKALFAARLKAGHKLLFFPEGTSTDGLRVLPFKT CCCCCCHHHHCCCEEEEECCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEEHHH TLFASLFEDDLREEMHVQPVSVVFDAPKGAERRFYGWWGDMDFGSHLLKVLAAQPQGGVE HHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCEE ILYHPPVRVADFADRKALAAYCEEVVRDGHASALPLVVDAVAKDHP EEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC >Mature Secondary Structure SVSWQSETPPEKTRITALGWGRVVLRGSALAVLVFGCLALLLMVRLVERPLFGVQRPLT CCCCCCCCCCCHHEEEEEECCEEEEECCHHHHHHHHHHHHHHHHHHHHCHHHHCCCCHH PFITVFVCRNAFRILGMRFHTRGRSMRAPGIVVANHSSWLDIFALNAKKRIYFVSKSEVA HHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEEECCCCEEEEEEECCCEEEEEEECCCCC GWPGIGWLARATGTVFIERNRAKAQEQKALFAARLKAGHKLLFFPEGTSTDGLRVLPFKT CCCCCCHHHHCCCEEEEECCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEEHHH TLFASLFEDDLREEMHVQPVSVVFDAPKGAERRFYGWWGDMDFGSHLLKVLAAQPQGGVE HHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCEE ILYHPPVRVADFADRKALAAYCEEVVRDGHASALPLVVDAVAKDHP EEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8748025 [H]