Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

Click here to switch to the map view.

The map label for this gene is 99081049

Identifier: 99081049

GI number: 99081049

Start: 1297294

End: 1298055

Strand: Direct

Name: 99081049

Synonym: TM1040_1208

Alternate gene names: NA

Gene position: 1297294-1298055 (Clockwise)

Preceding gene: 99081048

Following gene: 99081050

Centisome position: 40.53

GC content: 59.45

Gene sequence:

>762_bases
ATGCACGATGGCGCGCCACAGTTTTCCGTGAGGATGGCAAAGACCGACGAGGACCTACGCGCCGCGCAGGCGCTGCGCTA
CGAGGTCTTTGTGCGCGAGCTGGGCGGATGCGGGGCTCTGGTGGATCACGAAGCCGGGCTGGAGCGCGACCAGTTCGACC
CTTATTTCGATCATATGCTGGTGAGCGACGACACCTCGGGCGAGGTGGTTGGCGTCTACCGGTTGCTCCGGGGGGATCAG
GCCGAGCGTTTAGGGCGGTTTTATTCCGAGGATGAATATGATCTTGCGCCCTTGCGGGCTTCGGGGCGCAAACTTTTGGA
GTTGGGGCGCTCCTGCCTCCATGCGCAGTATCGCGGTGGCATGGCGATGTTTCACCTCTGGAACGGGCTTGCGGCTTATG
TGGCCGAACATGAAATCGAAGTGCTCTTTGGGGTGGCGTCCTTTCATGGCACCGATGCCATGGATCTGGCGCAACCTCTG
TCCATGCTGCATGCCAATCATCTCGCGCCTGAAGAATTACGCGTTCGTTCAAAGGCTTATCAGCCAATGAATGTATTGCC
CGAAGATCAGATCGACCGCCGCAAGGCGATGCTGGAGACGCCTGCGCTCATCAAGGCGTATCTGCGGCTCGGCGGGTTTG
TTGGCGACGGCGCTTATGTGGATCATGATTTCAACACCACGGATGTCTGTCTGATCCTCGACACCGCGCGCATGAACGCG
CGCCAGAAGAGCATCTATACCCGCGGAACCGCCTCTGCATGA

Upstream 100 bases:

>100_bases
TTATGAAAGGTTAACCAATCATAGACAAGTGTGCATATTTCTTGCGCACGAATATGCCGATGGGCTATTGCCCGCGACAA
ATCAAGGGTAGAGCTGAACC

Downstream 100 bases:

>100_bases
GTGTCAGCTGGCAGAGCGAGACGCCCCCCGAGAAGACCCGGATCACGGCGCTTGGTTGGGGCAGGGTGGTGCTGCGGGGC
AGTGCGCTTGCGGTGCTTGT

Product: ornithine-acyl[acyl carrier protein] N-acyltransferase

Products: NA

Alternate protein names: Hemolysin; Hemolysin-Like Protein; Ornithine-Acyl(Acyl Carrier Protein) N-Acyltransferase; Phospholipid/Glycerol Acyltransferase; Ornithine-Acyl(Acyl Carrier Protein) N- Acyltransferase; Ornithine-Acyl N-Acyltransferase; Phosphohistidine Phosphatase SixA; Acyltransferase Domain Protein; Hemolysin Protein; Acyl-CoA N-Acyltransferase; Acyl-CoA N-Acyltransferases Superfamily Protein; Nudix Hydrolase

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MHDGAPQFSVRMAKTDEDLRAAQALRYEVFVRELGGCGALVDHEAGLERDQFDPYFDHMLVSDDTSGEVVGVYRLLRGDQ
AERLGRFYSEDEYDLAPLRASGRKLLELGRSCLHAQYRGGMAMFHLWNGLAAYVAEHEIEVLFGVASFHGTDAMDLAQPL
SMLHANHLAPEELRVRSKAYQPMNVLPEDQIDRRKAMLETPALIKAYLRLGGFVGDGAYVDHDFNTTDVCLILDTARMNA
RQKSIYTRGTASA

Sequences:

>Translated_253_residues
MHDGAPQFSVRMAKTDEDLRAAQALRYEVFVRELGGCGALVDHEAGLERDQFDPYFDHMLVSDDTSGEVVGVYRLLRGDQ
AERLGRFYSEDEYDLAPLRASGRKLLELGRSCLHAQYRGGMAMFHLWNGLAAYVAEHEIEVLFGVASFHGTDAMDLAQPL
SMLHANHLAPEELRVRSKAYQPMNVLPEDQIDRRKAMLETPALIKAYLRLGGFVGDGAYVDHDFNTTDVCLILDTARMNA
RQKSIYTRGTASA
>Mature_253_residues
MHDGAPQFSVRMAKTDEDLRAAQALRYEVFVRELGGCGALVDHEAGLERDQFDPYFDHMLVSDDTSGEVVGVYRLLRGDQ
AERLGRFYSEDEYDLAPLRASGRKLLELGRSCLHAQYRGGMAMFHLWNGLAAYVAEHEIEVLFGVASFHGTDAMDLAQPL
SMLHANHLAPEELRVRSKAYQPMNVLPEDQIDRRKAMLETPALIKAYLRLGGFVGDGAYVDHDFNTTDVCLILDTARMNA
RQKSIYTRGTASA

Specific function: Unknown

COG id: COG3176

COG function: function code R; Putative hemolysin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28299; Mature: 28299

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHDGAPQFSVRMAKTDEDLRAAQALRYEVFVRELGGCGALVDHEAGLERDQFDPYFDHML
CCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCHHHHCEE
VSDDTSGEVVGVYRLLRGDQAERLGRFYSEDEYDLAPLRASGRKLLELGRSCLHAQYRGG
ECCCCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
MAMFHLWNGLAAYVAEHEIEVLFGVASFHGTDAMDLAQPLSMLHANHLAPEELRVRSKAY
CHHHHHHHHHHHHHHHHHHEEEEEEHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCC
QPMNVLPEDQIDRRKAMLETPALIKAYLRLGGFVGDGAYVDHDFNTTDVCLILDTARMNA
CCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCEECCCCEEECCCCCCEEEEEEECHHCCH
RQKSIYTRGTASA
HHHHHCCCCCCCC
>Mature Secondary Structure
MHDGAPQFSVRMAKTDEDLRAAQALRYEVFVRELGGCGALVDHEAGLERDQFDPYFDHML
CCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCHHHHCEE
VSDDTSGEVVGVYRLLRGDQAERLGRFYSEDEYDLAPLRASGRKLLELGRSCLHAQYRGG
ECCCCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
MAMFHLWNGLAAYVAEHEIEVLFGVASFHGTDAMDLAQPLSMLHANHLAPEELRVRSKAY
CHHHHHHHHHHHHHHHHHHEEEEEEHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCC
QPMNVLPEDQIDRRKAMLETPALIKAYLRLGGFVGDGAYVDHDFNTTDVCLILDTARMNA
CCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCEECCCCEEECCCCCCEEEEEEECHHCCH
RQKSIYTRGTASA
HHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA