| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99081049
Identifier: 99081049
GI number: 99081049
Start: 1297294
End: 1298055
Strand: Direct
Name: 99081049
Synonym: TM1040_1208
Alternate gene names: NA
Gene position: 1297294-1298055 (Clockwise)
Preceding gene: 99081048
Following gene: 99081050
Centisome position: 40.53
GC content: 59.45
Gene sequence:
>762_bases ATGCACGATGGCGCGCCACAGTTTTCCGTGAGGATGGCAAAGACCGACGAGGACCTACGCGCCGCGCAGGCGCTGCGCTA CGAGGTCTTTGTGCGCGAGCTGGGCGGATGCGGGGCTCTGGTGGATCACGAAGCCGGGCTGGAGCGCGACCAGTTCGACC CTTATTTCGATCATATGCTGGTGAGCGACGACACCTCGGGCGAGGTGGTTGGCGTCTACCGGTTGCTCCGGGGGGATCAG GCCGAGCGTTTAGGGCGGTTTTATTCCGAGGATGAATATGATCTTGCGCCCTTGCGGGCTTCGGGGCGCAAACTTTTGGA GTTGGGGCGCTCCTGCCTCCATGCGCAGTATCGCGGTGGCATGGCGATGTTTCACCTCTGGAACGGGCTTGCGGCTTATG TGGCCGAACATGAAATCGAAGTGCTCTTTGGGGTGGCGTCCTTTCATGGCACCGATGCCATGGATCTGGCGCAACCTCTG TCCATGCTGCATGCCAATCATCTCGCGCCTGAAGAATTACGCGTTCGTTCAAAGGCTTATCAGCCAATGAATGTATTGCC CGAAGATCAGATCGACCGCCGCAAGGCGATGCTGGAGACGCCTGCGCTCATCAAGGCGTATCTGCGGCTCGGCGGGTTTG TTGGCGACGGCGCTTATGTGGATCATGATTTCAACACCACGGATGTCTGTCTGATCCTCGACACCGCGCGCATGAACGCG CGCCAGAAGAGCATCTATACCCGCGGAACCGCCTCTGCATGA
Upstream 100 bases:
>100_bases TTATGAAAGGTTAACCAATCATAGACAAGTGTGCATATTTCTTGCGCACGAATATGCCGATGGGCTATTGCCCGCGACAA ATCAAGGGTAGAGCTGAACC
Downstream 100 bases:
>100_bases GTGTCAGCTGGCAGAGCGAGACGCCCCCCGAGAAGACCCGGATCACGGCGCTTGGTTGGGGCAGGGTGGTGCTGCGGGGC AGTGCGCTTGCGGTGCTTGT
Product: ornithine-acyl[acyl carrier protein] N-acyltransferase
Products: NA
Alternate protein names: Hemolysin; Hemolysin-Like Protein; Ornithine-Acyl(Acyl Carrier Protein) N-Acyltransferase; Phospholipid/Glycerol Acyltransferase; Ornithine-Acyl(Acyl Carrier Protein) N- Acyltransferase; Ornithine-Acyl N-Acyltransferase; Phosphohistidine Phosphatase SixA; Acyltransferase Domain Protein; Hemolysin Protein; Acyl-CoA N-Acyltransferase; Acyl-CoA N-Acyltransferases Superfamily Protein; Nudix Hydrolase
Number of amino acids: Translated: 253; Mature: 253
Protein sequence:
>253_residues MHDGAPQFSVRMAKTDEDLRAAQALRYEVFVRELGGCGALVDHEAGLERDQFDPYFDHMLVSDDTSGEVVGVYRLLRGDQ AERLGRFYSEDEYDLAPLRASGRKLLELGRSCLHAQYRGGMAMFHLWNGLAAYVAEHEIEVLFGVASFHGTDAMDLAQPL SMLHANHLAPEELRVRSKAYQPMNVLPEDQIDRRKAMLETPALIKAYLRLGGFVGDGAYVDHDFNTTDVCLILDTARMNA RQKSIYTRGTASA
Sequences:
>Translated_253_residues MHDGAPQFSVRMAKTDEDLRAAQALRYEVFVRELGGCGALVDHEAGLERDQFDPYFDHMLVSDDTSGEVVGVYRLLRGDQ AERLGRFYSEDEYDLAPLRASGRKLLELGRSCLHAQYRGGMAMFHLWNGLAAYVAEHEIEVLFGVASFHGTDAMDLAQPL SMLHANHLAPEELRVRSKAYQPMNVLPEDQIDRRKAMLETPALIKAYLRLGGFVGDGAYVDHDFNTTDVCLILDTARMNA RQKSIYTRGTASA >Mature_253_residues MHDGAPQFSVRMAKTDEDLRAAQALRYEVFVRELGGCGALVDHEAGLERDQFDPYFDHMLVSDDTSGEVVGVYRLLRGDQ AERLGRFYSEDEYDLAPLRASGRKLLELGRSCLHAQYRGGMAMFHLWNGLAAYVAEHEIEVLFGVASFHGTDAMDLAQPL SMLHANHLAPEELRVRSKAYQPMNVLPEDQIDRRKAMLETPALIKAYLRLGGFVGDGAYVDHDFNTTDVCLILDTARMNA RQKSIYTRGTASA
Specific function: Unknown
COG id: COG3176
COG function: function code R; Putative hemolysin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28299; Mature: 28299
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHDGAPQFSVRMAKTDEDLRAAQALRYEVFVRELGGCGALVDHEAGLERDQFDPYFDHML CCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCHHHHCEE VSDDTSGEVVGVYRLLRGDQAERLGRFYSEDEYDLAPLRASGRKLLELGRSCLHAQYRGG ECCCCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC MAMFHLWNGLAAYVAEHEIEVLFGVASFHGTDAMDLAQPLSMLHANHLAPEELRVRSKAY CHHHHHHHHHHHHHHHHHHEEEEEEHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCC QPMNVLPEDQIDRRKAMLETPALIKAYLRLGGFVGDGAYVDHDFNTTDVCLILDTARMNA CCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCEECCCCEEECCCCCCEEEEEEECHHCCH RQKSIYTRGTASA HHHHHCCCCCCCC >Mature Secondary Structure MHDGAPQFSVRMAKTDEDLRAAQALRYEVFVRELGGCGALVDHEAGLERDQFDPYFDHML CCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCHHHHCEE VSDDTSGEVVGVYRLLRGDQAERLGRFYSEDEYDLAPLRASGRKLLELGRSCLHAQYRGG ECCCCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC MAMFHLWNGLAAYVAEHEIEVLFGVASFHGTDAMDLAQPLSMLHANHLAPEELRVRSKAY CHHHHHHHHHHHHHHHHHHEEEEEEHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCC QPMNVLPEDQIDRRKAMLETPALIKAYLRLGGFVGDGAYVDHDFNTTDVCLILDTARMNA CCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCEECCCCEEECCCCCCEEEEEEECHHCCH RQKSIYTRGTASA HHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA