| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is proA [H]
Identifier: 99081046
GI number: 99081046
Start: 1294988
End: 1296292
Strand: Direct
Name: proA [H]
Synonym: TM1040_1205
Alternate gene names: 99081046
Gene position: 1294988-1296292 (Clockwise)
Preceding gene: 99081045
Following gene: 99081048
Centisome position: 40.46
GC content: 62.45
Gene sequence:
>1305_bases ATGGCTCGCACCCCGCCTGGGGAAGAAAAGGGCAAAGACATGAAAGATCTGGAAAATATTCCCGCGCTGATGGAAGACAT CGGCAAGCGCGCCAAAGCGGCTGCGCAACAGCTTGCGACAGCCTCGGCGGCGCAAAAGGAGCAGGCGCTCAACGCGGCCG CCGATGCGGTCTGGGCCCAGCGCGGCGAGATCATTGCCGCCAATGCCAAGGACCTGGAGTTCGGGCGCGACAAGGGCTTG TCCTCGGCGATGATGGATCGCTTGATGCTGGATGAAGCCCGTATTCAGGGCATCGTGGACGGGTTGCGCGCCGTGGCTGC GCAGGCGGACCCGGTCGGCGCCGTCCTGGACGAATGGACACAGCCCAGCGGTTTGCGCATTCAGCGCGTGCGCACGCCGC TGGGTGTCATTGGTGTGATCTATGAGAGCCGTCCCAATGTTACCGCAGACGCAGGCGCGCTGTGTCTGAAATCCGGCAAC GCGGTGATCCTGCGCGGCGGCTCCGAGAGCCTGCATTCCGCGCAGGCGATCCATGGCTGTCTTGCGGCGGGATTGCGCGC TGCAGATCTGCCCGAGGATGCGGTGCAACTGGTGCCGACCCGCGATCGTGCGGCGGTGCAGGAGCTCCTGACGATGACCG CGTATGTGGATGTGATCGTTCCGCGCGGTGGCAAAGGGCTGGTGGGGCTGGTGCAGCGCGAGGCCCGGGTGCCGGTCTTT GCGCACCTCGAAGGGATCGTGCATATCTACCTCGACAAAGATGCCGATCGTAAAAAGGCAATCGACGTGGTCTTGAACGC CAAGACCCGGCGTACCGGCATCTGTGGCGCGGCGGAGTGTCTGCTGATCCACGAGGACATTGCCGACAGCATCGGCAAGG ATGTGCTGGATCTGCTTGCCATGGGCGGGGTCGAAATCCATGCCGAAGAGGGGCTGCCCGGCCCTGACAGCATGCAGGTC GCCACGTCCGAGGATTGGGGTAAAGAATATCTCGACGCGATTATCGCCGCCAAAAAAGTGGCAAGCATCGACGAGGCAAT TGCCCATATCCGCAGGTATCATTCGGCCCATACCGATTGCATCATTACCGAGAATGATGCTGCCGTGGCGCAGTTTTTCT CTGAGCTCGACAGCGCGATCCTGATGCACAACGCCTCCACCCAGTTTGCCGATGGCGGCGAGTTTGGCATGGGAGCAGAG ATTGGCATTGCAACGGGCAAGATGCACGCGCGCGGACCGGTTGGGGCGACGCAGCTGACGAGTTTCAAATATCTCGTGCG CGGTGACGGCACCGTGCGCGCCTGA
Upstream 100 bases:
>100_bases TATGCTGGACGTGCGGCCCTGATCCACCGGGATGACATGGCGCTTTGATCCTGTCATTCTGGCGCTAAGAAGACGTCCTG CCGGCGCGTGATGTGGCGGT
Downstream 100 bases:
>100_bases CCTGCGTGACGGATGTGACGCCTTGCTGAAACGCAAAAACGCCGCTGAGAGATCAGCGGCGTTTTTCATAGGTATGGCGA CATGATTAGAAGCTGATCGA
Product: gamma-glutamyl phosphate reductase
Products: NA
Alternate protein names: GPR; Glutamate-5-semialdehyde dehydrogenase; Glutamyl-gamma-semialdehyde dehydrogenase; GSA dehydrogenase [H]
Number of amino acids: Translated: 434; Mature: 433
Protein sequence:
>434_residues MARTPPGEEKGKDMKDLENIPALMEDIGKRAKAAAQQLATASAAQKEQALNAAADAVWAQRGEIIAANAKDLEFGRDKGL SSAMMDRLMLDEARIQGIVDGLRAVAAQADPVGAVLDEWTQPSGLRIQRVRTPLGVIGVIYESRPNVTADAGALCLKSGN AVILRGGSESLHSAQAIHGCLAAGLRAADLPEDAVQLVPTRDRAAVQELLTMTAYVDVIVPRGGKGLVGLVQREARVPVF AHLEGIVHIYLDKDADRKKAIDVVLNAKTRRTGICGAAECLLIHEDIADSIGKDVLDLLAMGGVEIHAEEGLPGPDSMQV ATSEDWGKEYLDAIIAAKKVASIDEAIAHIRRYHSAHTDCIITENDAAVAQFFSELDSAILMHNASTQFADGGEFGMGAE IGIATGKMHARGPVGATQLTSFKYLVRGDGTVRA
Sequences:
>Translated_434_residues MARTPPGEEKGKDMKDLENIPALMEDIGKRAKAAAQQLATASAAQKEQALNAAADAVWAQRGEIIAANAKDLEFGRDKGL SSAMMDRLMLDEARIQGIVDGLRAVAAQADPVGAVLDEWTQPSGLRIQRVRTPLGVIGVIYESRPNVTADAGALCLKSGN AVILRGGSESLHSAQAIHGCLAAGLRAADLPEDAVQLVPTRDRAAVQELLTMTAYVDVIVPRGGKGLVGLVQREARVPVF AHLEGIVHIYLDKDADRKKAIDVVLNAKTRRTGICGAAECLLIHEDIADSIGKDVLDLLAMGGVEIHAEEGLPGPDSMQV ATSEDWGKEYLDAIIAAKKVASIDEAIAHIRRYHSAHTDCIITENDAAVAQFFSELDSAILMHNASTQFADGGEFGMGAE IGIATGKMHARGPVGATQLTSFKYLVRGDGTVRA >Mature_433_residues ARTPPGEEKGKDMKDLENIPALMEDIGKRAKAAAQQLATASAAQKEQALNAAADAVWAQRGEIIAANAKDLEFGRDKGLS SAMMDRLMLDEARIQGIVDGLRAVAAQADPVGAVLDEWTQPSGLRIQRVRTPLGVIGVIYESRPNVTADAGALCLKSGNA VILRGGSESLHSAQAIHGCLAAGLRAADLPEDAVQLVPTRDRAAVQELLTMTAYVDVIVPRGGKGLVGLVQREARVPVFA HLEGIVHIYLDKDADRKKAIDVVLNAKTRRTGICGAAECLLIHEDIADSIGKDVLDLLAMGGVEIHAEEGLPGPDSMQVA TSEDWGKEYLDAIIAAKKVASIDEAIAHIRRYHSAHTDCIITENDAAVAQFFSELDSAILMHNASTQFADGGEFGMGAEI GIATGKMHARGPVGATQLTSFKYLVRGDGTVRA
Specific function: Catalyzes the NADPH dependent reduction of L-gamma- glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate [H]
COG id: COG0014
COG function: function code E; Gamma-glutamyl phosphate reductase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gamma-glutamyl phosphate reductase family [H]
Homologues:
Organism=Homo sapiens, GI62912457, Length=429, Percent_Identity=35.6643356643357, Blast_Score=261, Evalue=1e-69, Organism=Homo sapiens, GI21361368, Length=429, Percent_Identity=35.6643356643357, Blast_Score=260, Evalue=1e-69, Organism=Escherichia coli, GI1786438, Length=417, Percent_Identity=42.9256594724221, Blast_Score=343, Evalue=1e-95, Organism=Caenorhabditis elegans, GI17569969, Length=423, Percent_Identity=37.5886524822695, Blast_Score=269, Evalue=2e-72, Organism=Caenorhabditis elegans, GI17569967, Length=423, Percent_Identity=37.5886524822695, Blast_Score=269, Evalue=2e-72, Organism=Saccharomyces cerevisiae, GI6324899, Length=431, Percent_Identity=38.9791183294664, Blast_Score=267, Evalue=3e-72, Organism=Drosophila melanogaster, GI21357643, Length=408, Percent_Identity=38.4803921568627, Blast_Score=278, Evalue=6e-75,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR016163 - InterPro: IPR016162 - InterPro: IPR015590 - InterPro: IPR000965 - InterPro: IPR012134 [H]
Pfam domain/function: PF00171 Aldedh [H]
EC number: =1.2.1.41 [H]
Molecular weight: Translated: 45943; Mature: 45812
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARTPPGEEKGKDMKDLENIPALMEDIGKRAKAAAQQLATASAAQKEQALNAAADAVWAQ CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RGEIIAANAKDLEFGRDKGLSSAMMDRLMLDEARIQGIVDGLRAVAAQADPVGAVLDEWT CCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC QPSGLRIQRVRTPLGVIGVIYESRPNVTADAGALCLKSGNAVILRGGSESLHSAQAIHGC CCCCCEEEEHHCCHHEEEEEEECCCCCCCCCCCEEEECCCEEEEECCCHHHHHHHHHHHH LAAGLRAADLPEDAVQLVPTRDRAAVQELLTMTAYVDVIVPRGGKGLVGLVQREARVPVF HHHCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHCCCCHH AHLEGIVHIYLDKDADRKKAIDVVLNAKTRRTGICGAAECLLIHEDIADSIGKDVLDLLA EECCCEEEEEECCCCCHHHHHHHEEECCCCCCCCCCHHHHEEEHHHHHHHHHHHHHHHHH MGGVEIHAEEGLPGPDSMQVATSEDWGKEYLDAIIAAKKVASIDEAIAHIRRYHSAHTDC HCCEEEEECCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE IITENDAAVAQFFSELDSAILMHNASTQFADGGEFGMGAEIGIATGKMHARGPVGATQLT EEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHH SFKYLVRGDGTVRA HEEEEEECCCCCCC >Mature Secondary Structure ARTPPGEEKGKDMKDLENIPALMEDIGKRAKAAAQQLATASAAQKEQALNAAADAVWAQ CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RGEIIAANAKDLEFGRDKGLSSAMMDRLMLDEARIQGIVDGLRAVAAQADPVGAVLDEWT CCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC QPSGLRIQRVRTPLGVIGVIYESRPNVTADAGALCLKSGNAVILRGGSESLHSAQAIHGC CCCCCEEEEHHCCHHEEEEEEECCCCCCCCCCCEEEECCCEEEEECCCHHHHHHHHHHHH LAAGLRAADLPEDAVQLVPTRDRAAVQELLTMTAYVDVIVPRGGKGLVGLVQREARVPVF HHHCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHCCCCHH AHLEGIVHIYLDKDADRKKAIDVVLNAKTRRTGICGAAECLLIHEDIADSIGKDVLDLLA EECCCEEEEEECCCCCHHHHHHHEEECCCCCCCCCCHHHHEEEHHHHHHHHHHHHHHHHH MGGVEIHAEEGLPGPDSMQVATSEDWGKEYLDAIIAAKKVASIDEAIAHIRRYHSAHTDC HCCEEEEECCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE IITENDAAVAQFFSELDSAILMHNASTQFADGGEFGMGAEIGIATGKMHARGPVGATQLT EEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHH SFKYLVRGDGTVRA HEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA