Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99081017

Identifier: 99081017

GI number: 99081017

Start: 1265730

End: 1266737

Strand: Reverse

Name: 99081017

Synonym: TM1040_1176

Alternate gene names: NA

Gene position: 1266737-1265730 (Counterclockwise)

Preceding gene: 99081018

Following gene: 99081015

Centisome position: 39.57

GC content: 63.39

Gene sequence:

>1008_bases
ATGCCGCTTGGCGCTCTCGCGCAGGGCTTTGCCAATCTCGGCACCGAGGCCACCGGCTTTGCGGTGCCAGAGCGCGGTGT
CGCCTTGAGGTTTCCCGAAGATCACGCCGCCCACCCCGAATATCGCATCGAATGGTGGTATCTCACCGCAAACCTGCGCA
CCGCCGAGGGCGCGGATCTCGGTATCCAATGGACCCTGTTTCGCTCGGCGCTTGCCCCGGAAGAGCGCGCAGGCTGGCAA
AGCCCACAAATCTGGATGGGACATGCCGCCCTCACCACAGCGACCACTCACCGCTTTGCAGAACGTATCGGGCGCGGTGG
CACGGGTCAGGCGGGTGTCTCGGCAGCACCGTTTTCCGCCTGGATCGACGATTGGGAGATGACCTCACCGGACGCAAGCT
TGGAGAAACTCACGCTCACGGCCCGGGGGCAGGATTTTTCCTATGATCTGGATCTTGCCGCAGATGCGCCGCTGATCTTG
CATGGGGATGCGGGCTACTCGGTGAAATCAGCCGACGGACAGGCCAGCTATTATTACGCCCAGCCTGCCTATGAGGTCCA
AGGCACCGTGACCCTGCCCGAAGGCCCGGTCAACGTCACCGGTTCAGCCTGGCTCGACCGGGAATGGTCGAGCCAGCCGC
TTGCAGAGGACCAGACCGGTTGGGACTGGTTCTCCTTGCGTCTTGACGATGGCGCCAAGCTGATGGGCTTTGTCCTGCGT
GGAGACCGGGGAGATTTCACCTCCGGGACATGGATCTCACCGGACGGGACAGCTCACCCGCTCTCGCCCGGCGCTTTTCA
GGCCACGCCCCAAGACTGGTCAGAGGTGGCCGGGCGTAGCCTTCCAACCACATGGCAGGTTTCCCTGCCCGAGCGCGACA
TCGACATCCGCGTGCGCGCGCTCAACCCAAAGGCCTGGATGGGAACGCGTTTTTCCTATTGGGAAGGCCCCATTCTGATC
TCCGGGAGCCACGGCGGCAGCGGGTATCTGGAGATGACGGGCTACTGA

Upstream 100 bases:

>100_bases
GGAGTATTTGCAAGTGATCGCTAGCCTTTCTCGCGTTTCCTCTTTGCTAACAGACGCAGGCATAGGCCTTTGTCTGTGTC
TATGTCTCTGGGCCGGGCTC

Downstream 100 bases:

>100_bases
CCGTCGCGCTCCAGCAGATCCGACGCACGATAATAGGCACGCGCCGCGCGATGGATCGGGGCCGTCTGCCCGTTTTGAAC
CATAGGTCCGGCCTCCAGAC

Product: hypothetical protein

Products: NA

Alternate protein names: Secreted Hydrolase; Hydrolase; Lipoprotein; ABC Transporter Type C Secreted Protein; Hydroxyneurosporene Synthase; ABC Transporter Lipoprotein; Secreted Hydrolase-Like; Twin-Arginine Translocation Pathway Signal; ABC-Type Transport System Hydrolase Component; Signal Peptide; Attachment Protein; Hydroxymethylglutaryl-Co A Reductase

Number of amino acids: Translated: 335; Mature: 334

Protein sequence:

>335_residues
MPLGALAQGFANLGTEATGFAVPERGVALRFPEDHAAHPEYRIEWWYLTANLRTAEGADLGIQWTLFRSALAPEERAGWQ
SPQIWMGHAALTTATTHRFAERIGRGGTGQAGVSAAPFSAWIDDWEMTSPDASLEKLTLTARGQDFSYDLDLAADAPLIL
HGDAGYSVKSADGQASYYYAQPAYEVQGTVTLPEGPVNVTGSAWLDREWSSQPLAEDQTGWDWFSLRLDDGAKLMGFVLR
GDRGDFTSGTWISPDGTAHPLSPGAFQATPQDWSEVAGRSLPTTWQVSLPERDIDIRVRALNPKAWMGTRFSYWEGPILI
SGSHGGSGYLEMTGY

Sequences:

>Translated_335_residues
MPLGALAQGFANLGTEATGFAVPERGVALRFPEDHAAHPEYRIEWWYLTANLRTAEGADLGIQWTLFRSALAPEERAGWQ
SPQIWMGHAALTTATTHRFAERIGRGGTGQAGVSAAPFSAWIDDWEMTSPDASLEKLTLTARGQDFSYDLDLAADAPLIL
HGDAGYSVKSADGQASYYYAQPAYEVQGTVTLPEGPVNVTGSAWLDREWSSQPLAEDQTGWDWFSLRLDDGAKLMGFVLR
GDRGDFTSGTWISPDGTAHPLSPGAFQATPQDWSEVAGRSLPTTWQVSLPERDIDIRVRALNPKAWMGTRFSYWEGPILI
SGSHGGSGYLEMTGY
>Mature_334_residues
PLGALAQGFANLGTEATGFAVPERGVALRFPEDHAAHPEYRIEWWYLTANLRTAEGADLGIQWTLFRSALAPEERAGWQS
PQIWMGHAALTTATTHRFAERIGRGGTGQAGVSAAPFSAWIDDWEMTSPDASLEKLTLTARGQDFSYDLDLAADAPLILH
GDAGYSVKSADGQASYYYAQPAYEVQGTVTLPEGPVNVTGSAWLDREWSSQPLAEDQTGWDWFSLRLDDGAKLMGFVLRG
DRGDFTSGTWISPDGTAHPLSPGAFQATPQDWSEVAGRSLPTTWQVSLPERDIDIRVRALNPKAWMGTRFSYWEGPILIS
GSHGGSGYLEMTGY

Specific function: Unknown

COG id: COG5621

COG function: function code R; Predicted secreted hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36533; Mature: 36401

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLGALAQGFANLGTEATGFAVPERGVALRFPEDHAAHPEYRIEWWYLTANLRTAEGADL
CCHHHHHHHHHHCCCCCCCEECCCCCEEEECCCCCCCCCCEEEEEEEEEEEEEECCCCCC
GIQWTLFRSALAPEERAGWQSPQIWMGHAALTTATTHRFAERIGRGGTGQAGVSAAPFSA
CEEEEEHHHHCCCHHHCCCCCCCEEECCEEEHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
WIDDWEMTSPDASLEKLTLTARGQDFSYDLDLAADAPLILHGDAGYSVKSADGQASYYYA
HCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCEEEECCCCCEEECCCCCEEEEEE
QPAYEVQGTVTLPEGPVNVTGSAWLDREWSSQPLAEDQTGWDWFSLRLDDGAKLMGFVLR
CCCEEEEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEEE
GDRGDFTSGTWISPDGTAHPLSPGAFQATPQDWSEVAGRSLPTTWQVSLPERDIDIRVRA
CCCCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCEEEEECCCCCCEEEEEE
LNPKAWMGTRFSYWEGPILISGSHGGSGYLEMTGY
ECCCHHCCCCEEECCCCEEEECCCCCCCEEEECCC
>Mature Secondary Structure 
PLGALAQGFANLGTEATGFAVPERGVALRFPEDHAAHPEYRIEWWYLTANLRTAEGADL
CHHHHHHHHHHCCCCCCCEECCCCCEEEECCCCCCCCCCEEEEEEEEEEEEEECCCCCC
GIQWTLFRSALAPEERAGWQSPQIWMGHAALTTATTHRFAERIGRGGTGQAGVSAAPFSA
CEEEEEHHHHCCCHHHCCCCCCCEEECCEEEHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
WIDDWEMTSPDASLEKLTLTARGQDFSYDLDLAADAPLILHGDAGYSVKSADGQASYYYA
HCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCEEEECCCCCEEECCCCCEEEEEE
QPAYEVQGTVTLPEGPVNVTGSAWLDREWSSQPLAEDQTGWDWFSLRLDDGAKLMGFVLR
CCCEEEEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEEE
GDRGDFTSGTWISPDGTAHPLSPGAFQATPQDWSEVAGRSLPTTWQVSLPERDIDIRVRA
CCCCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCEEEEECCCCCCEEEEEE
LNPKAWMGTRFSYWEGPILISGSHGGSGYLEMTGY
ECCCHHCCCCEEECCCCEEEECCCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA