| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99081013
Identifier: 99081013
GI number: 99081013
Start: 1262032
End: 1262481
Strand: Reverse
Name: 99081013
Synonym: TM1040_1172
Alternate gene names: NA
Gene position: 1262481-1262032 (Counterclockwise)
Preceding gene: 99081014
Following gene: 99081012
Centisome position: 39.44
GC content: 58.0
Gene sequence:
>450_bases ATGTCCCATCTCGCGATCGAATTGCACTGGCAACGTACTGAAAACGAACTGCAAACCGGTAAGTTCTCGAACGAGCACAC GGTCCAGTACAATAGCACCTACGACGTCCAGGTGGACGCCGCCCCCGATTGGGGCGGCGACGCTGCAAACACAAATCCCG AGCAAGCCCTCGCCTCTGCCCTGTCGAGCTGCCACATGATGACCTTTCTGGCGCTCTCGGCCAAGGCGGGGTGGCCGGTT GCAAGCTATCATGACTATGCAGAGGCGCACCTTGGCAAGAACGCCAAAGGCCAGATGTCCGTGACCCGGATCGATCTCAA TCCGGTGGTGCGATTTGATACGGGCTTTAGCGTCGATGCGGAGGAGCTCGCCCAGATGCAGGACCGCGCGCACCGCTACT GCTTTATCGCCAATACCCTGGCCGATAGCGTTGAAATCAACATTCATTGA
Upstream 100 bases:
>100_bases ATGACCTCGGGTGCAACCTCTGCCAGCGTTGTGGAGCGTCCCTTCTTTGATCCGCGCAAGCAGATTGCCGCCGCCTGAGC GTTGGAGAGGAGACCAAAAC
Downstream 100 bases:
>100_bases AAGAACACCCATGCAAACGGATGCAATCCTCCTCAAGCAATTGAGCGAGACCGGCGTGCTGCGCCTCACGCTGAATGATG TCGCGCGCCGCAATGCACTC
Product: OsmC-like protein
Products: NA
Alternate protein names: OsmC-Like Protein; Redox Protein; OsmC/Ohr Family Protein; Redox Protein Regulator Of Disulfide Bond Formation; Osmc Family Protein; Regulator Of Disulfide Bond Formation; Stress-Induced Protein OsmC-Like Protein; OsmC-Like Family
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MSHLAIELHWQRTENELQTGKFSNEHTVQYNSTYDVQVDAAPDWGGDAANTNPEQALASALSSCHMMTFLALSAKAGWPV ASYHDYAEAHLGKNAKGQMSVTRIDLNPVVRFDTGFSVDAEELAQMQDRAHRYCFIANTLADSVEINIH
Sequences:
>Translated_149_residues MSHLAIELHWQRTENELQTGKFSNEHTVQYNSTYDVQVDAAPDWGGDAANTNPEQALASALSSCHMMTFLALSAKAGWPV ASYHDYAEAHLGKNAKGQMSVTRIDLNPVVRFDTGFSVDAEELAQMQDRAHRYCFIANTLADSVEINIH >Mature_148_residues SHLAIELHWQRTENELQTGKFSNEHTVQYNSTYDVQVDAAPDWGGDAANTNPEQALASALSSCHMMTFLALSAKAGWPVA SYHDYAEAHLGKNAKGQMSVTRIDLNPVVRFDTGFSVDAEELAQMQDRAHRYCFIANTLADSVEINIH
Specific function: Unknown
COG id: COG1764
COG function: function code O; Predicted redox protein, regulator of disulfide bond formation
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16526; Mature: 16395
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHLAIELHWQRTENELQTGKFSNEHTVQYNSTYDVQVDAAPDWGGDAANTNPEQALASA CCCEEEEEEECCCCCHHHCCCCCCCCEEEECCEEEEEEECCCCCCCCCCCCCHHHHHHHH LSSCHMMTFLALSAKAGWPVASYHDYAEAHLGKNAKGQMSVTRIDLNPVVRFDTGFSVDA HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEECCEEEEECCCCCCCH EELAQMQDRAHRYCFIANTLADSVEINIH HHHHHHHHHHHEEEEEECCCCCEEEEEEC >Mature Secondary Structure SHLAIELHWQRTENELQTGKFSNEHTVQYNSTYDVQVDAAPDWGGDAANTNPEQALASA CCEEEEEEECCCCCHHHCCCCCCCCEEEECCEEEEEEECCCCCCCCCCCCCHHHHHHHH LSSCHMMTFLALSAKAGWPVASYHDYAEAHLGKNAKGQMSVTRIDLNPVVRFDTGFSVDA HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEECCEEEEECCCCCCCH EELAQMQDRAHRYCFIANTLADSVEINIH HHHHHHHHHHHEEEEEECCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA