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The map label for this gene is 99081009

Identifier: 99081009

GI number: 99081009

Start: 1256394

End: 1256972

Strand: Reverse

Name: 99081009

Synonym: TM1040_1168

Alternate gene names: NA

Gene position: 1256972-1256394 (Counterclockwise)

Preceding gene: 99081010

Following gene: 99081008

Centisome position: 39.27

GC content: 59.41

Gene sequence:

>579_bases
ATGCTGCGTCGCCTATATGACCGGACCATGGCCCTTGCCGACCATCCCCATGCGCTGTGGTGGCTGGCCGGTGTGGCCTT
CATCGAAAGCTCCGTTTTTCCGATCCCGCCCGATGTGCTGATGATCCCGATGATCCTTGCGCGGCCCTCTCGCGCCTGGC
TGATCGCCTTGGTGGCGCTGTTTTCCTCGGTGGCCGGCGGGCTCATGGGCTACGCAATCGGCGCCTTCTTTTACGAAGGC
ATCGGCCAACCGATCCTCGAGGCCATGGGCAAGGCCGACAAGATGGTCGAATTCAACGAGCGTTTTAACGACTTTGGCTT
CTGGGCGGTGCTGATCGCTGGGGTGACACCCTTCCCCTACAAGGTCATCACCATCATGTCGGGCTGGACGGGCATGCCGA
TCATGACATTCGTGGTCACATCGTTGCTGGCACGGGCGTTGCGGTTCTTCCTCGTGGCCGGGCTCTTGTGGCAATTTGGC
GCGCCAGTGCGGGAGTTTATTGAAAAACGCCTGGGGCTGGTGTTCACCGTCTTTTGTGTGCTGCTGTTTGGTGGCTTTCT
TGCACTGAGGTATCTATGA

Upstream 100 bases:

>100_bases
AAATTCGCCCATCTCCGGGTGCATCGGCAGTGCAGAGTTGACCCGGGCGGGCGCACATGCGACCTCCGCCCCATTGCTTG
TCTCTGAGGTTTCCCCCCGA

Downstream 100 bases:

>100_bases
CATTCAGCCGATTTCTCGTCCTGCTCGCGGCCGGTGGCTCTGCCGCCTTGCTGCTGGGCGCCTTTGCGTTTCAATACATT
GGCGAGCTTGCGCCCTGCAA

Product: DedA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MLRRLYDRTMALADHPHALWWLAGVAFIESSVFPIPPDVLMIPMILARPSRAWLIALVALFSSVAGGLMGYAIGAFFYEG
IGQPILEAMGKADKMVEFNERFNDFGFWAVLIAGVTPFPYKVITIMSGWTGMPIMTFVVTSLLARALRFFLVAGLLWQFG
APVREFIEKRLGLVFTVFCVLLFGGFLALRYL

Sequences:

>Translated_192_residues
MLRRLYDRTMALADHPHALWWLAGVAFIESSVFPIPPDVLMIPMILARPSRAWLIALVALFSSVAGGLMGYAIGAFFYEG
IGQPILEAMGKADKMVEFNERFNDFGFWAVLIAGVTPFPYKVITIMSGWTGMPIMTFVVTSLLARALRFFLVAGLLWQFG
APVREFIEKRLGLVFTVFCVLLFGGFLALRYL
>Mature_192_residues
MLRRLYDRTMALADHPHALWWLAGVAFIESSVFPIPPDVLMIPMILARPSRAWLIALVALFSSVAGGLMGYAIGAFFYEG
IGQPILEAMGKADKMVEFNERFNDFGFWAVLIAGVTPFPYKVITIMSGWTGMPIMTFVVTSLLARALRFFLVAGLLWQFG
APVREFIEKRLGLVFTVFCVLLFGGFLALRYL

Specific function: Unknown

COG id: COG1238

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 21479; Mature: 21479

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRRLYDRTMALADHPHALWWLAGVAFIESSVFPIPPDVLMIPMILARPSRAWLIALVAL
CHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHH
FSSVAGGLMGYAIGAFFYEGIGQPILEAMGKADKMVEFNERFNDFGFWAVLIAGVTPFPY
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
KVITIMSGWTGMPIMTFVVTSLLARALRFFLVAGLLWQFGAPVREFIEKRLGLVFTVFCV
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
LLFGGFLALRYL
HHHHHHHHHHCC
>Mature Secondary Structure
MLRRLYDRTMALADHPHALWWLAGVAFIESSVFPIPPDVLMIPMILARPSRAWLIALVAL
CHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHH
FSSVAGGLMGYAIGAFFYEGIGQPILEAMGKADKMVEFNERFNDFGFWAVLIAGVTPFPY
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
KVITIMSGWTGMPIMTFVVTSLLARALRFFLVAGLLWQFGAPVREFIEKRLGLVFTVFCV
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
LLFGGFLALRYL
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8478068 [H]