| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99081005
Identifier: 99081005
GI number: 99081005
Start: 1253517
End: 1254446
Strand: Reverse
Name: 99081005
Synonym: TM1040_1164
Alternate gene names: NA
Gene position: 1254446-1253517 (Counterclockwise)
Preceding gene: 99081006
Following gene: 99081004
Centisome position: 39.19
GC content: 61.61
Gene sequence:
>930_bases ATGAGCACGCTTCAAGCTCCGGCAGCTGTGGTTATGGTGCGCCCGCATCATTTTACCTCAAACCCGGAAACGCGAGGGGA CAACGCCTTTCAGGCGCAGGCCGATACCAATGCCGACACCATCAGCGCACGCGCGATCGCGGAATTCGACAGCGCGGTCG CCGCGCTGCGCGACGCTGGCGTAACGGTTCATGTGTTCGAGGACACCAGCCGCGACACCCCCGATTCCGTCTTTCCCAAC AACTGGTTCTCCACCCATGCCGGTGGTCATGTGGCGGTCTATCCGATGTTTGCACCCAACCGTCGCCGGGAGCGACGCTG GGACGTGATCGAGATGCTGAAGCGGGAGTATCGCGTTCAGGACGTGATCGACTATTCCGGCCTGGAACAGGACTCTCTGT CGCTCGAAGGCACCGGCGCCATGGTGCTCGATCATATCGGGCGCATTGCCTATACGGTAAAGTCAAACCGCGCGGATCCG GTGCTGCTGGAGCGGTTCTGCACCCATTTCAACTATGAACCGATGGTCTTCGAGGCCTGCGACGATCAGGGGCGTGACGT GTATCACACCAATGTCCTGATGGGTATCGGTACCGACTATGCGCTGATCTGTCTGGATATGATCCGCGATACCACCCGCC GCGCTGAAGTCAGGCAGCGGCTCGAAGAAAGCGGGCGCAGCGTCATCGACCTGTCTGCCGCGCAGATCCAGAACTTTCTC GGCAACACCTTCGAACTCACTGGGCACCGGCGCGTGCTGGCGCTCTCTGCCCGCGCGGCACAGGCGCTGACCCCGGACCA GCGGGCGGTGATCGAACGCTCGGCAGAATTGCTGCCGCTCTCCATTCCCACACTTGAAACGGCCGGTGGGTCGGTGCGTT GCATGCTCGCCGGCATTCACCTCAGCCCCCGTCAAAGGACCATGCAATGA
Upstream 100 bases:
>100_bases TCCTCGACGAGCGTGGCCGTACAGCACATCTGATGGTGGATCTCTGTGCCTCTGCCATGGGGCGGCGCGTCTTTGACCGA CCGACCCGGAGCTACAACAC
Downstream 100 bases:
>100_bases CCCAACCTTCCGATAAGGCCCTTGTTCCTTTTGTCAGCGTAGACAACATGATGCGCCTCATTCATCATGTTGGCATCGAG GATATGATGCGTGATCTGGC
Product: amidinotransferase family protein
Products: NA
Alternate protein names: Amidinotransferase; Pentein-Type Domain-Containing Protein
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MSTLQAPAAVVMVRPHHFTSNPETRGDNAFQAQADTNADTISARAIAEFDSAVAALRDAGVTVHVFEDTSRDTPDSVFPN NWFSTHAGGHVAVYPMFAPNRRRERRWDVIEMLKREYRVQDVIDYSGLEQDSLSLEGTGAMVLDHIGRIAYTVKSNRADP VLLERFCTHFNYEPMVFEACDDQGRDVYHTNVLMGIGTDYALICLDMIRDTTRRAEVRQRLEESGRSVIDLSAAQIQNFL GNTFELTGHRRVLALSARAAQALTPDQRAVIERSAELLPLSIPTLETAGGSVRCMLAGIHLSPRQRTMQ
Sequences:
>Translated_309_residues MSTLQAPAAVVMVRPHHFTSNPETRGDNAFQAQADTNADTISARAIAEFDSAVAALRDAGVTVHVFEDTSRDTPDSVFPN NWFSTHAGGHVAVYPMFAPNRRRERRWDVIEMLKREYRVQDVIDYSGLEQDSLSLEGTGAMVLDHIGRIAYTVKSNRADP VLLERFCTHFNYEPMVFEACDDQGRDVYHTNVLMGIGTDYALICLDMIRDTTRRAEVRQRLEESGRSVIDLSAAQIQNFL GNTFELTGHRRVLALSARAAQALTPDQRAVIERSAELLPLSIPTLETAGGSVRCMLAGIHLSPRQRTMQ >Mature_308_residues STLQAPAAVVMVRPHHFTSNPETRGDNAFQAQADTNADTISARAIAEFDSAVAALRDAGVTVHVFEDTSRDTPDSVFPNN WFSTHAGGHVAVYPMFAPNRRRERRWDVIEMLKREYRVQDVIDYSGLEQDSLSLEGTGAMVLDHIGRIAYTVKSNRADPV LLERFCTHFNYEPMVFEACDDQGRDVYHTNVLMGIGTDYALICLDMIRDTTRRAEVRQRLEESGRSVIDLSAAQIQNFLG NTFELTGHRRVLALSARAAQALTPDQRAVIERSAELLPLSIPTLETAGGSVRCMLAGIHLSPRQRTMQ
Specific function: Unknown
COG id: COG4874
COG function: function code S; Uncharacterized protein conserved in bacteria containing a pentein-type domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34434; Mature: 34303
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLQAPAAVVMVRPHHFTSNPETRGDNAFQAQADTNADTISARAIAEFDSAVAALRDAG CCCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHCC VTVHVFEDTSRDTPDSVFPNNWFSTHAGGHVAVYPMFAPNRRRERRWDVIEMLKREYRVQ CEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHH DVIDYSGLEQDSLSLEGTGAMVLDHIGRIAYTVKSNRADPVLLERFCTHFNYEPMVFEAC HHHHHCCCCCCCCEECCCCHHHHHHHHHEEEEEECCCCCHHHHHHHHHHCCCCCEEEECC DDQGRDVYHTNVLMGIGTDYALICLDMIRDTTRRAEVRQRLEESGRSVIDLSAAQIQNFL CCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHH GNTFELTGHRRVLALSARAAQALTPDQRAVIERSAELLPLSIPTLETAGGSVRCMLAGIH CCEEEECCCEEEEEEEHHHHHHCCCHHHHHHHHCCCEEEEECCCEECCCCCEEEEEEEEE LSPRQRTMQ CCCHHHCCC >Mature Secondary Structure STLQAPAAVVMVRPHHFTSNPETRGDNAFQAQADTNADTISARAIAEFDSAVAALRDAG CCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHCC VTVHVFEDTSRDTPDSVFPNNWFSTHAGGHVAVYPMFAPNRRRERRWDVIEMLKREYRVQ CEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHH DVIDYSGLEQDSLSLEGTGAMVLDHIGRIAYTVKSNRADPVLLERFCTHFNYEPMVFEAC HHHHHCCCCCCCCEECCCCHHHHHHHHHEEEEEECCCCCHHHHHHHHHHCCCCCEEEECC DDQGRDVYHTNVLMGIGTDYALICLDMIRDTTRRAEVRQRLEESGRSVIDLSAAQIQNFL CCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHH GNTFELTGHRRVLALSARAAQALTPDQRAVIERSAELLPLSIPTLETAGGSVRCMLAGIH CCEEEECCCEEEEEEEHHHHHHCCCHHHHHHHHCCCEEEEECCCEECCCCCEEEEEEEEE LSPRQRTMQ CCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA