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The map label for this gene is yngJ [H]

Identifier: 99080944

GI number: 99080944

Start: 1183842

End: 1184987

Strand: Reverse

Name: yngJ [H]

Synonym: TM1040_1103

Alternate gene names: 99080944

Gene position: 1184987-1183842 (Counterclockwise)

Preceding gene: 99080946

Following gene: 99080943

Centisome position: 37.02

GC content: 61.17

Gene sequence:

>1146_bases
ATGGACTTCGCAATGACAGAAGAGCAGACGGCCATCTTTGACATGGCTTATGGCTTTGGCCAGGAGCATATCGCGCCTTT
TGCCCGCCAGTGGGAATCTGAAGGCACCATCCCCAAGGATCTGTGGCCCAAGGTGGGTGAGCTGGGCTTTGGCTCTCTTT
ATGTAAGCGAAGAGTCCGGCGGCTCCGGCCTTTTGCGGCTGGATGCCACCCTGGTCTTTGAGGCGCTGTCGATGGCCTGC
CCCTCGGTGGCAGCGTTCCTGTCGATTCACAACATGTGCGCCAAGATGCTCGACATGTTTGCCAGCGACGATTTGAAGGC
GCGCGTGATGGACGACGTCATGAGCCTCAACACGGTGCTGAGCTACTGCCTCACCGAACCGGGGTCCGGCTCTGACGCGG
CGGCGCTCAAGACCCGCGCGAGCCGGGACAACGAAGGCTATGTGCTCAACGGCACCAAGGCGTTCATCTCCGGCGGCGGC
TATTCCGACGCCTATGTCTGCATGGTGCGCACCGGCGAGGACGGCCCCAAGGGGATCTCCACGCTCTATGTCGAGGATGG
CACGCCGGGGCTCTCGTTTGGCGGGCTTGAGGACAAGATGGGCTGGAAGAGCCAGCCCACCGCGCAGGTGCAATTTGACG
ACTGCCGCGTGCCGGCGGGCAATCTCGTGGGCCAGGAGGGCGACGGGTTCAAATACGCCATGAAGGGCCTTGATGGCGGG
CGTCTCAACATTGCCGCCTGTTCGCTTGGCGCCGCGCAAGCCGGGCTAAATGCGACGCTGCAATACATGTCCGAGCGCAA
GGCCTTTGGCAAATCCATCGACCAGTTCCAGGGGCTTCAGTTCCGCCTCGCGGATATGGAGATCGAGCTTCAGGCCGCAC
GCACCTTCCTGCGCCAGGCCGCATGGAAACTGGACCAGGGCAGCCCGGATGCCACCAAATTCTGCGCCATGGCAAAGAAA
TTCGTGACCGAAACCGGCTCCAACGTGGTGGATCAATGCCTGCAGCTGCACGGCGGCTATGGCTATCTCGCGGATTACGG
CATCGAGAAGCTGGTACGCGACCTTCGGGTGCATCAGATCCTTGAAGGCACCAATGAGATCATGCGCGTGATCGTCGCCC
GTCATATGCTGGCGGAAAACCACTAA

Upstream 100 bases:

>100_bases
GTGCATATTGAAGTGACGCCCCGAGCCGCGTAAGAAATAAACAGTTGTTCAATTCTTGTGGCGCCGCATGCGGCCACATT
TGAAACGGGGAGGAGAACCC

Downstream 100 bases:

>100_bases
GTGTCTCAGGAAAGGACCGCCGCCATGAGCGACATCCATATCCGTATCGAAGGGCGCGCAGGGCGCATAACGCTCACCCG
CGAAAAGGCCCTCAACGCCC

Product: acyl-CoA dehydrogenase-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MDFAMTEEQTAIFDMAYGFGQEHIAPFARQWESEGTIPKDLWPKVGELGFGSLYVSEESGGSGLLRLDATLVFEALSMAC
PSVAAFLSIHNMCAKMLDMFASDDLKARVMDDVMSLNTVLSYCLTEPGSGSDAAALKTRASRDNEGYVLNGTKAFISGGG
YSDAYVCMVRTGEDGPKGISTLYVEDGTPGLSFGGLEDKMGWKSQPTAQVQFDDCRVPAGNLVGQEGDGFKYAMKGLDGG
RLNIAACSLGAAQAGLNATLQYMSERKAFGKSIDQFQGLQFRLADMEIELQAARTFLRQAAWKLDQGSPDATKFCAMAKK
FVTETGSNVVDQCLQLHGGYGYLADYGIEKLVRDLRVHQILEGTNEIMRVIVARHMLAENH

Sequences:

>Translated_381_residues
MDFAMTEEQTAIFDMAYGFGQEHIAPFARQWESEGTIPKDLWPKVGELGFGSLYVSEESGGSGLLRLDATLVFEALSMAC
PSVAAFLSIHNMCAKMLDMFASDDLKARVMDDVMSLNTVLSYCLTEPGSGSDAAALKTRASRDNEGYVLNGTKAFISGGG
YSDAYVCMVRTGEDGPKGISTLYVEDGTPGLSFGGLEDKMGWKSQPTAQVQFDDCRVPAGNLVGQEGDGFKYAMKGLDGG
RLNIAACSLGAAQAGLNATLQYMSERKAFGKSIDQFQGLQFRLADMEIELQAARTFLRQAAWKLDQGSPDATKFCAMAKK
FVTETGSNVVDQCLQLHGGYGYLADYGIEKLVRDLRVHQILEGTNEIMRVIVARHMLAENH
>Mature_381_residues
MDFAMTEEQTAIFDMAYGFGQEHIAPFARQWESEGTIPKDLWPKVGELGFGSLYVSEESGGSGLLRLDATLVFEALSMAC
PSVAAFLSIHNMCAKMLDMFASDDLKARVMDDVMSLNTVLSYCLTEPGSGSDAAALKTRASRDNEGYVLNGTKAFISGGG
YSDAYVCMVRTGEDGPKGISTLYVEDGTPGLSFGGLEDKMGWKSQPTAQVQFDDCRVPAGNLVGQEGDGFKYAMKGLDGG
RLNIAACSLGAAQAGLNATLQYMSERKAFGKSIDQFQGLQFRLADMEIELQAARTFLRQAAWKLDQGSPDATKFCAMAKK
FVTETGSNVVDQCLQLHGGYGYLADYGIEKLVRDLRVHQILEGTNEIMRVIVARHMLAENH

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI7656849, Length=375, Percent_Identity=50.1333333333333, Blast_Score=394, Evalue=1e-110,
Organism=Homo sapiens, GI4557231, Length=379, Percent_Identity=33.509234828496, Blast_Score=233, Evalue=3e-61,
Organism=Homo sapiens, GI187960098, Length=379, Percent_Identity=33.509234828496, Blast_Score=233, Evalue=3e-61,
Organism=Homo sapiens, GI4501859, Length=377, Percent_Identity=35.5437665782493, Blast_Score=231, Evalue=6e-61,
Organism=Homo sapiens, GI4557233, Length=375, Percent_Identity=36, Blast_Score=230, Evalue=2e-60,
Organism=Homo sapiens, GI4501857, Length=363, Percent_Identity=34.435261707989, Blast_Score=218, Evalue=5e-57,
Organism=Homo sapiens, GI226958412, Length=383, Percent_Identity=31.8537859007833, Blast_Score=208, Evalue=6e-54,
Organism=Homo sapiens, GI76496475, Length=387, Percent_Identity=33.5917312661499, Blast_Score=201, Evalue=1e-51,
Organism=Homo sapiens, GI4557235, Length=387, Percent_Identity=33.5917312661499, Blast_Score=201, Evalue=1e-51,
Organism=Homo sapiens, GI21361497, Length=355, Percent_Identity=34.0845070422535, Blast_Score=197, Evalue=1e-50,
Organism=Homo sapiens, GI226958414, Length=347, Percent_Identity=32.2766570605187, Blast_Score=195, Evalue=6e-50,
Organism=Homo sapiens, GI38505218, Length=283, Percent_Identity=27.208480565371, Blast_Score=109, Evalue=3e-24,
Organism=Homo sapiens, GI48976061, Length=373, Percent_Identity=26.8096514745308, Blast_Score=100, Evalue=3e-21,
Organism=Homo sapiens, GI211971008, Length=373, Percent_Identity=26.8096514745308, Blast_Score=100, Evalue=4e-21,
Organism=Homo sapiens, GI4503943, Length=381, Percent_Identity=26.7716535433071, Blast_Score=98, Evalue=1e-20,
Organism=Homo sapiens, GI7669494, Length=366, Percent_Identity=26.2295081967213, Blast_Score=88, Evalue=1e-17,
Organism=Escherichia coli, GI87081958, Length=390, Percent_Identity=30, Blast_Score=164, Evalue=1e-41,
Organism=Escherichia coli, GI1786223, Length=386, Percent_Identity=28.2383419689119, Blast_Score=159, Evalue=3e-40,
Organism=Escherichia coli, GI87082384, Length=262, Percent_Identity=28.2442748091603, Blast_Score=85, Evalue=8e-18,
Organism=Caenorhabditis elegans, GI17533517, Length=371, Percent_Identity=47.4393530997305, Blast_Score=374, Evalue=1e-104,
Organism=Caenorhabditis elegans, GI17534899, Length=382, Percent_Identity=33.7696335078534, Blast_Score=238, Evalue=3e-63,
Organism=Caenorhabditis elegans, GI17570075, Length=383, Percent_Identity=33.1592689295039, Blast_Score=233, Evalue=2e-61,
Organism=Caenorhabditis elegans, GI17569725, Length=381, Percent_Identity=32.5459317585302, Blast_Score=229, Evalue=1e-60,
Organism=Caenorhabditis elegans, GI17506239, Length=372, Percent_Identity=32.7956989247312, Blast_Score=213, Evalue=1e-55,
Organism=Caenorhabditis elegans, GI17508101, Length=372, Percent_Identity=30.9139784946237, Blast_Score=211, Evalue=4e-55,
Organism=Caenorhabditis elegans, GI17538396, Length=381, Percent_Identity=30.9711286089239, Blast_Score=192, Evalue=2e-49,
Organism=Caenorhabditis elegans, GI71985184, Length=379, Percent_Identity=30.6068601583113, Blast_Score=188, Evalue=4e-48,
Organism=Caenorhabditis elegans, GI17551932, Length=359, Percent_Identity=32.8690807799443, Blast_Score=174, Evalue=1e-43,
Organism=Caenorhabditis elegans, GI71990804, Length=283, Percent_Identity=36.3957597173145, Blast_Score=172, Evalue=3e-43,
Organism=Caenorhabditis elegans, GI17505929, Length=359, Percent_Identity=32.5905292479109, Blast_Score=168, Evalue=4e-42,
Organism=Caenorhabditis elegans, GI32563615, Length=227, Percent_Identity=35.6828193832599, Blast_Score=147, Evalue=8e-36,
Organism=Caenorhabditis elegans, GI71982178, Length=274, Percent_Identity=29.5620437956204, Blast_Score=147, Evalue=9e-36,
Organism=Caenorhabditis elegans, GI71985192, Length=313, Percent_Identity=30.0319488817891, Blast_Score=139, Evalue=2e-33,
Organism=Caenorhabditis elegans, GI17534353, Length=386, Percent_Identity=25.3886010362694, Blast_Score=118, Evalue=6e-27,
Organism=Caenorhabditis elegans, GI17531909, Length=242, Percent_Identity=28.099173553719, Blast_Score=105, Evalue=4e-23,
Organism=Caenorhabditis elegans, GI17562446, Length=326, Percent_Identity=25.1533742331288, Blast_Score=90, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17531913, Length=178, Percent_Identity=29.2134831460674, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI86563383, Length=325, Percent_Identity=24.9230769230769, Blast_Score=72, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI86563381, Length=325, Percent_Identity=24.9230769230769, Blast_Score=72, Evalue=7e-13,
Organism=Drosophila melanogaster, GI24660351, Length=378, Percent_Identity=34.1269841269841, Blast_Score=236, Evalue=3e-62,
Organism=Drosophila melanogaster, GI21356377, Length=378, Percent_Identity=35.978835978836, Blast_Score=233, Evalue=1e-61,
Organism=Drosophila melanogaster, GI24666513, Length=372, Percent_Identity=35.2150537634409, Blast_Score=222, Evalue=4e-58,
Organism=Drosophila melanogaster, GI24646207, Length=377, Percent_Identity=34.4827586206897, Blast_Score=216, Evalue=2e-56,
Organism=Drosophila melanogaster, GI21355753, Length=383, Percent_Identity=32.1148825065274, Blast_Score=201, Evalue=6e-52,
Organism=Drosophila melanogaster, GI281363737, Length=351, Percent_Identity=33.048433048433, Blast_Score=182, Evalue=4e-46,
Organism=Drosophila melanogaster, GI19920834, Length=388, Percent_Identity=28.3505154639175, Blast_Score=111, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 41324; Mature: 41324

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: PS00072 ACYL_COA_DH_1 ; PS00073 ACYL_COA_DH_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFAMTEEQTAIFDMAYGFGQEHIAPFARQWESEGTIPKDLWPKVGELGFGSLYVSEESG
CCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHCHHHCCCCCCEEEEECCCC
GSGLLRLDATLVFEALSMACPSVAAFLSIHNMCAKMLDMFASDDLKARVMDDVMSLNTVL
CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
SYCLTEPGSGSDAAALKTRASRDNEGYVLNGTKAFISGGGYSDAYVCMVRTGEDGPKGIS
HHHHCCCCCCCCHHHHHHHCCCCCCCEEEECCEEEECCCCCCCEEEEEEEECCCCCCCCE
TLYVEDGTPGLSFGGLEDKMGWKSQPTAQVQFDDCRVPAGNLVGQEGDGFKYAMKGLDGG
EEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHCCCCCC
RLNIAACSLGAAQAGLNATLQYMSERKAFGKSIDQFQGLQFRLADMEIELQAARTFLRQA
CEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCEEEEECCEEHHHHHHHHHHHH
AWKLDQGSPDATKFCAMAKKFVTETGSNVVDQCLQLHGGYGYLADYGIEKLVRDLRVHQI
HHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
LEGTNEIMRVIVARHMLAENH
HHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDFAMTEEQTAIFDMAYGFGQEHIAPFARQWESEGTIPKDLWPKVGELGFGSLYVSEESG
CCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHCHHHCCCCCCEEEEECCCC
GSGLLRLDATLVFEALSMACPSVAAFLSIHNMCAKMLDMFASDDLKARVMDDVMSLNTVL
CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
SYCLTEPGSGSDAAALKTRASRDNEGYVLNGTKAFISGGGYSDAYVCMVRTGEDGPKGIS
HHHHCCCCCCCCHHHHHHHCCCCCCCEEEECCEEEECCCCCCCEEEEEEEECCCCCCCCE
TLYVEDGTPGLSFGGLEDKMGWKSQPTAQVQFDDCRVPAGNLVGQEGDGFKYAMKGLDGG
EEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHCCCCCC
RLNIAACSLGAAQAGLNATLQYMSERKAFGKSIDQFQGLQFRLADMEIELQAARTFLRQA
CEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCEEEEECCEEHHHHHHHHHHHH
AWKLDQGSPDATKFCAMAKKFVTETGSNVVDQCLQLHGGYGYLADYGIEKLVRDLRVHQI
HHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
LEGTNEIMRVIVARHMLAENH
HHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]