| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is nemA [H]
Identifier: 99080614
GI number: 99080614
Start: 827885
End: 828559
Strand: Direct
Name: nemA [H]
Synonym: TM1040_0773
Alternate gene names: 99080614
Gene position: 827885-828559 (Clockwise)
Preceding gene: 99080611
Following gene: 99080615
Centisome position: 25.86
GC content: 61.33
Gene sequence:
>675_bases GTGAGCCAGAAACTGTTCGCCGAACCAACCGCCGGTGCCCTTGAGTTGACAACTCGCTTGGTGATTGCACCGCTGAAGCA CGATCGTGCCGGTGACACCACCGCAGAGGTGCTTGAGCGTTACGCCGAATACTACGCCCAACGCGCCAGCGCCGGTCTGA TCATCACCGAAGGCAGCCAGATCAGCGCTGAGGCCAGAGGGTACATCCAGACCCCCGGCATCCACACCGCCGCGCAGGCT GCTGCATGGCGCAAGGTCACTGATGCGGTGCATGCCAAGGGCGGCAAAATCGTGATCCAGATGTGGCACGTGGGGCGTAG CACACATGCCGGGTTTGAACCCACCGCGACGCCCGAGGCGCTGACGGTTGGAGGCATTCAGCGCGTGATCGAAGATCGCG TTCAGGCCGCGACATACGCCAAAGAGGCAGGATTTGACGGCGTTGAGTTGCATGTCGCCAATGGTTGTTTGCTGGAGCAA TTCCGAAAGGATAGGGTCAACACCCGCAGCGATGCCTATGGCGGATCGGCAGAAAATCGGGCGCGTTTGCTGTTTGAGGT TCTGGATGCCTTGGCCACCGTCTGGGAGCCGGGGCGCATTGCCGTGCGTCTGGCACCCTTTGCCAGCTTAACGATGTCTT CGATAGCGCCCCCATGGCCCATTCCACCCCGCTGA
Upstream 100 bases:
>100_bases GAACATTCTCGTTGCTGGAGGGGTGAGAGGCGCAGGGAATGCTCTGTTCAAGTGGAGCAATACGCCTGATGCAGTATACC TTGAGCGACGGATACTCCCC
Downstream 100 bases:
>100_bases TCGAACGACTGAACACCCATGGTCTGGCCTGATTGTACCTGATCAGAGGCGACACCGGTGGCGCGCTTAGGGGATTTTGA GATCCTCCGCCAGCTTTATA
Product: NADH:flavin oxidoreductase/NADH oxidase
Products: NADP; Cytotoxic compound [C]
Alternate protein names: N-ethylmaleimide reducing enzyme [H]
Number of amino acids: Translated: 224; Mature: 223
Protein sequence:
>224_residues MSQKLFAEPTAGALELTTRLVIAPLKHDRAGDTTAEVLERYAEYYAQRASAGLIITEGSQISAEARGYIQTPGIHTAAQA AAWRKVTDAVHAKGGKIVIQMWHVGRSTHAGFEPTATPEALTVGGIQRVIEDRVQAATYAKEAGFDGVELHVANGCLLEQ FRKDRVNTRSDAYGGSAENRARLLFEVLDALATVWEPGRIAVRLAPFASLTMSSIAPPWPIPPR
Sequences:
>Translated_224_residues MSQKLFAEPTAGALELTTRLVIAPLKHDRAGDTTAEVLERYAEYYAQRASAGLIITEGSQISAEARGYIQTPGIHTAAQA AAWRKVTDAVHAKGGKIVIQMWHVGRSTHAGFEPTATPEALTVGGIQRVIEDRVQAATYAKEAGFDGVELHVANGCLLEQ FRKDRVNTRSDAYGGSAENRARLLFEVLDALATVWEPGRIAVRLAPFASLTMSSIAPPWPIPPR >Mature_223_residues SQKLFAEPTAGALELTTRLVIAPLKHDRAGDTTAEVLERYAEYYAQRASAGLIITEGSQISAEARGYIQTPGIHTAAQAA AWRKVTDAVHAKGGKIVIQMWHVGRSTHAGFEPTATPEALTVGGIQRVIEDRVQAATYAKEAGFDGVELHVANGCLLEQF RKDRVNTRSDAYGGSAENRARLLFEVLDALATVWEPGRIAVRLAPFASLTMSSIAPPWPIPPR
Specific function: Catalyzes the reduction of N-ethylmaleimide (NEM) to N- ethylsuccinimide [H]
COG id: COG1902
COG function: function code C; NADH:flavin oxidoreductases, Old Yellow Enzyme family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NADH:flavin oxidoreductase/NADH oxidase family [H]
Homologues:
Organism=Escherichia coli, GI1787939, Length=249, Percent_Identity=40.9638554216867, Blast_Score=181, Evalue=2e-47, Organism=Escherichia coli, GI1789463, Length=165, Percent_Identity=34.5454545454545, Blast_Score=90, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17559804, Length=194, Percent_Identity=31.4432989690722, Blast_Score=83, Evalue=9e-17, Organism=Caenorhabditis elegans, GI17565138, Length=187, Percent_Identity=33.1550802139037, Blast_Score=81, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17559802, Length=117, Percent_Identity=41.025641025641, Blast_Score=77, Evalue=7e-15, Organism=Caenorhabditis elegans, GI17540738, Length=121, Percent_Identity=37.1900826446281, Blast_Score=77, Evalue=7e-15, Organism=Caenorhabditis elegans, GI17564188, Length=128, Percent_Identity=35.9375, Blast_Score=75, Evalue=2e-14, Organism=Caenorhabditis elegans, GI72001454, Length=187, Percent_Identity=27.2727272727273, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17566914, Length=183, Percent_Identity=29.5081967213115, Blast_Score=68, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6325086, Length=247, Percent_Identity=35.2226720647773, Blast_Score=123, Evalue=2e-29, Organism=Saccharomyces cerevisiae, GI6321973, Length=243, Percent_Identity=34.9794238683128, Blast_Score=119, Evalue=4e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR001155 [H]
Pfam domain/function: PF00724 Oxidored_FMN [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 24202; Mature: 24071
Theoretical pI: Translated: 7.76; Mature: 7.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQKLFAEPTAGALELTTRLVIAPLKHDRAGDTTAEVLERYAEYYAQRASAGLIITEGSQ CCCCCCCCCCCCHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCC ISAEARGYIQTPGIHTAAQAAAWRKVTDAVHAKGGKIVIQMWHVGRSTHAGFEPTATPEA CCCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCH LTVGGIQRVIEDRVQAATYAKEAGFDGVELHVANGCLLEQFRKDRVNTRSDAYGGSAENR HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCHHH ARLLFEVLDALATVWEPGRIAVRLAPFASLTMSSIAPPWPIPPR HHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SQKLFAEPTAGALELTTRLVIAPLKHDRAGDTTAEVLERYAEYYAQRASAGLIITEGSQ CCCCCCCCCCCHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCC ISAEARGYIQTPGIHTAAQAAAWRKVTDAVHAKGGKIVIQMWHVGRSTHAGFEPTATPEA CCCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCH LTVGGIQRVIEDRVQAATYAKEAGFDGVELHVANGCLLEQFRKDRVNTRSDAYGGSAENR HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCHHH ARLLFEVLDALATVWEPGRIAVRLAPFASLTMSSIAPPWPIPPR HHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: FMN. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NADPH; N-ethylmaleimide [C]
Specific reaction: NADPH + N-ethylmaleimide = NADP + Cytotoxic compound [C]
General reaction: Reduction [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9013822; 9278503 [H]