Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99080577

Identifier: 99080577

GI number: 99080577

Start: 793741

End: 794145

Strand: Direct

Name: 99080577

Synonym: TM1040_0736

Alternate gene names: NA

Gene position: 793741-794145 (Clockwise)

Preceding gene: 99080576

Following gene: 99080578

Centisome position: 24.8

GC content: 55.31

Gene sequence:

>405_bases
ATGAAGGCAAGGAGCCGCAGTTTGAGTGACCAGCATGTCGCTTGGGCGTCGCGCCTGTTTTTTCATACCTGTCCAACATG
TGGCGGAGCGGTGCCGCTTTCGCATCTCACGGGGCGCGGTTGGCCGCAGATTGCCGAGTGTCGAGGCTGTGGAAAGCACT
GGCGAGTCGCGCTCAGTTCTCGAGCATACCTTTGGCGGTTTGTATCGCGCGCAATACCACTGGTATTTTTCTCTCTGTTT
GTGACAAGCGCCGCGCTCCACTTCGCCTTTCCTGAACTGTCGTATCTGGCGCAAAACGGTCAGACCAAGCTGCGTTTCGT
GGCTTTCCCATTCCTGGTTTTCTCCGCTTTGGCGTCCGTACTATTTTTTTCACGTCGTCTCCCTTTGGAAGAGGAACCGA
AATGA

Upstream 100 bases:

>100_bases
ATCCCCGCGAGATCGCCTTTCTCGACGCTTTGCCGATGACGGTTACGGGCAAGGTGATCCGTAAAGAACTCAAGGCGCGG
GCTGCGGGGGAGGGGAAGTG

Downstream 100 bases:

>100_bases
AACTTCAATCCAAGGCAATGCCCTCCTCTGAAGGGTTCAAGGCAAACAAAGCTGCCCATCTCTCCGCTCTGGCCGAGATC
AGCGAGGCCGCCGAGGCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MKARSRSLSDQHVAWASRLFFHTCPTCGGAVPLSHLTGRGWPQIAECRGCGKHWRVALSSRAYLWRFVSRAIPLVFFSLF
VTSAALHFAFPELSYLAQNGQTKLRFVAFPFLVFSALASVLFFSRRLPLEEEPK

Sequences:

>Translated_134_residues
MKARSRSLSDQHVAWASRLFFHTCPTCGGAVPLSHLTGRGWPQIAECRGCGKHWRVALSSRAYLWRFVSRAIPLVFFSLF
VTSAALHFAFPELSYLAQNGQTKLRFVAFPFLVFSALASVLFFSRRLPLEEEPK
>Mature_134_residues
MKARSRSLSDQHVAWASRLFFHTCPTCGGAVPLSHLTGRGWPQIAECRGCGKHWRVALSSRAYLWRFVSRAIPLVFFSLF
VTSAALHFAFPELSYLAQNGQTKLRFVAFPFLVFSALASVLFFSRRLPLEEEPK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15163; Mature: 15163

Theoretical pI: Translated: 11.12; Mature: 11.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKARSRSLSDQHVAWASRLFFHTCPTCGGAVPLSHLTGRGWPQIAECRGCGKHWRVALSS
CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCHHHHHCCCHHHHHHHHH
RAYLWRFVSRAIPLVFFSLFVTSAALHFAFPELSYLAQNGQTKLRFVAFPFLVFSALASV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
LFFSRRLPLEEEPK
HHHHHCCCCCCCCC
>Mature Secondary Structure
MKARSRSLSDQHVAWASRLFFHTCPTCGGAVPLSHLTGRGWPQIAECRGCGKHWRVALSS
CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCHHHHHCCCHHHHHHHHH
RAYLWRFVSRAIPLVFFSLFVTSAALHFAFPELSYLAQNGQTKLRFVAFPFLVFSALASV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
LFFSRRLPLEEEPK
HHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA