| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
Click here to switch to the map view.
The map label for this gene is 99080577
Identifier: 99080577
GI number: 99080577
Start: 793741
End: 794145
Strand: Direct
Name: 99080577
Synonym: TM1040_0736
Alternate gene names: NA
Gene position: 793741-794145 (Clockwise)
Preceding gene: 99080576
Following gene: 99080578
Centisome position: 24.8
GC content: 55.31
Gene sequence:
>405_bases ATGAAGGCAAGGAGCCGCAGTTTGAGTGACCAGCATGTCGCTTGGGCGTCGCGCCTGTTTTTTCATACCTGTCCAACATG TGGCGGAGCGGTGCCGCTTTCGCATCTCACGGGGCGCGGTTGGCCGCAGATTGCCGAGTGTCGAGGCTGTGGAAAGCACT GGCGAGTCGCGCTCAGTTCTCGAGCATACCTTTGGCGGTTTGTATCGCGCGCAATACCACTGGTATTTTTCTCTCTGTTT GTGACAAGCGCCGCGCTCCACTTCGCCTTTCCTGAACTGTCGTATCTGGCGCAAAACGGTCAGACCAAGCTGCGTTTCGT GGCTTTCCCATTCCTGGTTTTCTCCGCTTTGGCGTCCGTACTATTTTTTTCACGTCGTCTCCCTTTGGAAGAGGAACCGA AATGA
Upstream 100 bases:
>100_bases ATCCCCGCGAGATCGCCTTTCTCGACGCTTTGCCGATGACGGTTACGGGCAAGGTGATCCGTAAAGAACTCAAGGCGCGG GCTGCGGGGGAGGGGAAGTG
Downstream 100 bases:
>100_bases AACTTCAATCCAAGGCAATGCCCTCCTCTGAAGGGTTCAAGGCAAACAAAGCTGCCCATCTCTCCGCTCTGGCCGAGATC AGCGAGGCCGCCGAGGCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MKARSRSLSDQHVAWASRLFFHTCPTCGGAVPLSHLTGRGWPQIAECRGCGKHWRVALSSRAYLWRFVSRAIPLVFFSLF VTSAALHFAFPELSYLAQNGQTKLRFVAFPFLVFSALASVLFFSRRLPLEEEPK
Sequences:
>Translated_134_residues MKARSRSLSDQHVAWASRLFFHTCPTCGGAVPLSHLTGRGWPQIAECRGCGKHWRVALSSRAYLWRFVSRAIPLVFFSLF VTSAALHFAFPELSYLAQNGQTKLRFVAFPFLVFSALASVLFFSRRLPLEEEPK >Mature_134_residues MKARSRSLSDQHVAWASRLFFHTCPTCGGAVPLSHLTGRGWPQIAECRGCGKHWRVALSSRAYLWRFVSRAIPLVFFSLF VTSAALHFAFPELSYLAQNGQTKLRFVAFPFLVFSALASVLFFSRRLPLEEEPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15163; Mature: 15163
Theoretical pI: Translated: 11.12; Mature: 11.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKARSRSLSDQHVAWASRLFFHTCPTCGGAVPLSHLTGRGWPQIAECRGCGKHWRVALSS CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCHHHHHCCCHHHHHHHHH RAYLWRFVSRAIPLVFFSLFVTSAALHFAFPELSYLAQNGQTKLRFVAFPFLVFSALASV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH LFFSRRLPLEEEPK HHHHHCCCCCCCCC >Mature Secondary Structure MKARSRSLSDQHVAWASRLFFHTCPTCGGAVPLSHLTGRGWPQIAECRGCGKHWRVALSS CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCHHHHHCCCHHHHHHHHH RAYLWRFVSRAIPLVFFSLFVTSAALHFAFPELSYLAQNGQTKLRFVAFPFLVFSALASV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH LFFSRRLPLEEEPK HHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA