| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99080574
Identifier: 99080574
GI number: 99080574
Start: 790985
End: 791335
Strand: Direct
Name: 99080574
Synonym: TM1040_0733
Alternate gene names: NA
Gene position: 790985-791335 (Clockwise)
Preceding gene: 99080573
Following gene: 99080576
Centisome position: 24.71
GC content: 62.39
Gene sequence:
>351_bases ATGCGGGTCGCCTATTGGTTCCCGGTTGCAATGCTGGCGCTTGTGCTGGCGGTTGTCGGGTTCCGTTACGGGCTGATCCG GCAGGGGATCACCGAAACCGATGTGATTACGCTCTATGCGCAGAAATACCTCGGGGATCACGCAGACTCTGGGGCTTTGG GATCGGCGCAGATCAGCGATTGCGCAGCGCGTCCGGCAGAGCGCGGGCATCTTTGGACCTGGCTCGTGGTGACATGCCGC CCGGAGGGTCATACGGATGCTGGGAGCTTTCGCTACCGGATAAACTGGCTGGGCGGGCTGATTGAGTACATTGCGCCAGG AGAAGGCGCGCCACGCGCGCCACAGACCTGA
Upstream 100 bases:
>100_bases TTCCGCGATGCCAAGCTGATGGAGATCGGAGCGGGCACGTCAGAAATTCGACGCATGCTGATCGGGCGCGAGTTGATGGG CCATATGAGCTAAGGCGCAG
Downstream 100 bases:
>100_bases CCGCGCAACTGGCGCGGTGGCAAGGCAAGCGCCGCGCAAGGACGGTGGAACAAAAAAGCGCCACCATGAAGGTGGCGCAA CTGGGATGGAAATGCTGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 116; Mature: 116
Protein sequence:
>116_residues MRVAYWFPVAMLALVLAVVGFRYGLIRQGITETDVITLYAQKYLGDHADSGALGSAQISDCAARPAERGHLWTWLVVTCR PEGHTDAGSFRYRINWLGGLIEYIAPGEGAPRAPQT
Sequences:
>Translated_116_residues MRVAYWFPVAMLALVLAVVGFRYGLIRQGITETDVITLYAQKYLGDHADSGALGSAQISDCAARPAERGHLWTWLVVTCR PEGHTDAGSFRYRINWLGGLIEYIAPGEGAPRAPQT >Mature_116_residues MRVAYWFPVAMLALVLAVVGFRYGLIRQGITETDVITLYAQKYLGDHADSGALGSAQISDCAARPAERGHLWTWLVVTCR PEGHTDAGSFRYRINWLGGLIEYIAPGEGAPRAPQT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12722; Mature: 12722
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVAYWFPVAMLALVLAVVGFRYGLIRQGITETDVITLYAQKYLGDHADSGALGSAQISD CCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHH CAARPAERGHLWTWLVVTCRPEGHTDAGSFRYRINWLGGLIEYIAPGEGAPRAPQT HHCCCCCCCCEEEEEEEEECCCCCCCCCCEEEEEHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MRVAYWFPVAMLALVLAVVGFRYGLIRQGITETDVITLYAQKYLGDHADSGALGSAQISD CCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHH CAARPAERGHLWTWLVVTCRPEGHTDAGSFRYRINWLGGLIEYIAPGEGAPRAPQT HHCCCCCCCCEEEEEEEEECCCCCCCCCCEEEEEHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA