| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
Click here to switch to the map view.
The map label for this gene is 99080546
Identifier: 99080546
GI number: 99080546
Start: 756188
End: 756643
Strand: Reverse
Name: 99080546
Synonym: TM1040_0705
Alternate gene names: NA
Gene position: 756643-756188 (Counterclockwise)
Preceding gene: 99080547
Following gene: 99080545
Centisome position: 23.64
GC content: 61.18
Gene sequence:
>456_bases TTGACGCCTGACCCGGAGGCCCAGCCGCAGGACGTGTTCCTGTTTCAAAGAGACGCGCGCTCTCTTAGGTCGATTGTTTT GGTCGCGGCCTGGGCCGCGGCTGTCGGTCTGATCTGGGTCGTGTTCGACGCACGGGGCTGGGTGCTGGCGCTCCTTGCGT TGCCTTTGCTGCCCTCGCTCTGGGAGCTGTGGCGCCCCCATGCAGCCTGGCTCCGGATCACCGACACTCATTTGAGCTGG CGCAGCCTGCGCAGCTCTGGTGACATCTCACTGGCCGAGATCGATCATATCCGGATGGTCACGCGGAGCGATTTTTCGGT GCGGGCCACGATCCATACACGCCCGGGCACCCATCATCAGATCCCTCCCGAAGTCACCCCCAAGGCGTCAGTCCTGGAAG CCGCACTTCAACAGCGGCAAGTTGCCTTAAAAATACAGCATTTTACTGTTCTCTGA
Upstream 100 bases:
>100_bases TATGATGCCGGACGTCAGGACAAGATCAGAGCAGAACTCAAGCGGATCAAGGCAACCGAGGGGCTGAGCCGGGATACCAA CGAGATGGTGAGCCGTATCC
Downstream 100 bases:
>100_bases GCGGTTCCAATCCGCGCTTCTTGCCGGCATTTTTTGCCCTGCAAACATAATGCCGCGCTTTTGCCGCCATCTGCTGTCGC GGTGCCGAAATTGATCCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MTPDPEAQPQDVFLFQRDARSLRSIVLVAAWAAAVGLIWVVFDARGWVLALLALPLLPSLWELWRPHAAWLRITDTHLSW RSLRSSGDISLAEIDHIRMVTRSDFSVRATIHTRPGTHHQIPPEVTPKASVLEAALQQRQVALKIQHFTVL
Sequences:
>Translated_151_residues MTPDPEAQPQDVFLFQRDARSLRSIVLVAAWAAAVGLIWVVFDARGWVLALLALPLLPSLWELWRPHAAWLRITDTHLSW RSLRSSGDISLAEIDHIRMVTRSDFSVRATIHTRPGTHHQIPPEVTPKASVLEAALQQRQVALKIQHFTVL >Mature_150_residues TPDPEAQPQDVFLFQRDARSLRSIVLVAAWAAAVGLIWVVFDARGWVLALLALPLLPSLWELWRPHAAWLRITDTHLSWR SLRSSGDISLAEIDHIRMVTRSDFSVRATIHTRPGTHHQIPPEVTPKASVLEAALQQRQVALKIQHFTVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17075; Mature: 16944
Theoretical pI: Translated: 10.65; Mature: 10.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPDPEAQPQDVFLFQRDARSLRSIVLVAAWAAAVGLIWVVFDARGWVLALLALPLLPSL CCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHH WELWRPHAAWLRITDTHLSWRSLRSSGDISLAEIDHIRMVTRSDFSVRATIHTRPGTHHQ HHHHCCCEEEEEEECCCCHHHHHCCCCCEEHHHHHHHHEEECCCCEEEEEEEECCCCCCC IPPEVTPKASVLEAALQQRQVALKIQHFTVL CCCCCCCHHHHHHHHHHHHHHHEEEEEEECC >Mature Secondary Structure TPDPEAQPQDVFLFQRDARSLRSIVLVAAWAAAVGLIWVVFDARGWVLALLALPLLPSL CCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHH WELWRPHAAWLRITDTHLSWRSLRSSGDISLAEIDHIRMVTRSDFSVRATIHTRPGTHHQ HHHHCCCEEEEEEECCCCHHHHHCCCCCEEHHHHHHHHEEECCCCEEEEEEEECCCCCCC IPPEVTPKASVLEAALQQRQVALKIQHFTVL CCCCCCCHHHHHHHHHHHHHHHEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA