| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99080541
Identifier: 99080541
GI number: 99080541
Start: 749165
End: 749440
Strand: Direct
Name: 99080541
Synonym: TM1040_0700
Alternate gene names: NA
Gene position: 749165-749440 (Clockwise)
Preceding gene: 99080540
Following gene: 99080544
Centisome position: 23.4
GC content: 57.25
Gene sequence:
>276_bases ATGATCGATCCTGACAAGCTCAAAACCCACGCCGCCCTCTTTGACAGAATGGGCAAGGCGGTTGGGCTCGACCTTGAAGA AGAGGCCATCAGCGGCTCGCTTCAGTTTGAAGAAATTGCCGAAGCGGTTCTGCGCTGCACCCGTTGTGCGTGCCTCAAAA CCTGCTCGCGCTACCTTGGGACCCTGACCCAAGAGATAGACCGCACCCCGGACTATTGCCGCAACTCCGACCTGCTTGCC TATCTCAAGGAAGAACGGGGCTTGGCGGCAGAATAA
Upstream 100 bases:
>100_bases GCTGAGTGCGGGGCCAAAACCTCTATTTGACCTGCATCAAGGCGCGCGCCTTCCAGATCTCATATGACGCTATGGGACCT TATGAGGAGGAACGCGCATC
Downstream 100 bases:
>100_bases GCATCACCGTCCGTCTCTGACGTGAAAAAGGCGACCTTGCGGTCGCCTCTTTTGTCTTACGTTCTGGCTGGACGCTTAGC CAAGCTTCTTGGCTACAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 91; Mature: 91
Protein sequence:
>91_residues MIDPDKLKTHAALFDRMGKAVGLDLEEEAISGSLQFEEIAEAVLRCTRCACLKTCSRYLGTLTQEIDRTPDYCRNSDLLA YLKEERGLAAE
Sequences:
>Translated_91_residues MIDPDKLKTHAALFDRMGKAVGLDLEEEAISGSLQFEEIAEAVLRCTRCACLKTCSRYLGTLTQEIDRTPDYCRNSDLLA YLKEERGLAAE >Mature_91_residues MIDPDKLKTHAALFDRMGKAVGLDLEEEAISGSLQFEEIAEAVLRCTRCACLKTCSRYLGTLTQEIDRTPDYCRNSDLLA YLKEERGLAAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10186; Mature: 10186
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 5.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 7.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDPDKLKTHAALFDRMGKAVGLDLEEEAISGSLQFEEIAEAVLRCTRCACLKTCSRYLG CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH TLTQEIDRTPDYCRNSDLLAYLKEERGLAAE HHHHHHHCCCCHHCCCHHHHHHHHHCCCCCC >Mature Secondary Structure MIDPDKLKTHAALFDRMGKAVGLDLEEEAISGSLQFEEIAEAVLRCTRCACLKTCSRYLG CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH TLTQEIDRTPDYCRNSDLLAYLKEERGLAAE HHHHHHHCCCCHHCCCHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA