Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99080540

Identifier: 99080540

GI number: 99080540

Start: 748689

End: 749069

Strand: Direct

Name: 99080540

Synonym: TM1040_0699

Alternate gene names: NA

Gene position: 748689-749069 (Clockwise)

Preceding gene: 99080539

Following gene: 99080541

Centisome position: 23.39

GC content: 60.63

Gene sequence:

>381_bases
ATGACAAAAAAGACAGAGGCCGCCGAGAAGGCGCTTACAAAGCTTGGTGTGGTGCTCACGGACCGAGGGTCAAAATATGC
TGTAAGCGGTGCCCCTGTGCAAAGCCGGGAGGAGGTGGATGCGGTGCTGTCCACGCTCAAGGAAGACCGCAGCTATGCCA
AGGCAACGCACAATACCTGGGCTGCCATGCTTCCGAGCGGTGGGCTCAAGGCCGATGATGGGGAAAGCGGAGCAGGCATG
GTGATCCTGCGGATGATGGAGCGCGAGGCCCTCAGCAATCATGTGATTATCGTCACGCGCTGGTATGGCGGCAAGAAACT
GGGCGGCGACCGCTTCCGACGGGTGCAGGACGCGGTGCGTGCCTATCTCGACGCTGGCTGA

Upstream 100 bases:

>100_bases
CCGGGAGATGTATTCCTTGGCACCCATCCGGCCAATCCCGACCGCATCCGTATCGTGCAAAGAACGATCCGCAAATACGG
TTTGAACTGAGGTTCCCCCG

Downstream 100 bases:

>100_bases
GTGCGGGGCCAAAACCTCTATTTGACCTGCATCAAGGCGCGCGCCTTCCAGATCTCATATGACGCTATGGGACCTTATGA
GGAGGAACGCGCATCATGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 126; Mature: 125

Protein sequence:

>126_residues
MTKKTEAAEKALTKLGVVLTDRGSKYAVSGAPVQSREEVDAVLSTLKEDRSYAKATHNTWAAMLPSGGLKADDGESGAGM
VILRMMEREALSNHVIIVTRWYGGKKLGGDRFRRVQDAVRAYLDAG

Sequences:

>Translated_126_residues
MTKKTEAAEKALTKLGVVLTDRGSKYAVSGAPVQSREEVDAVLSTLKEDRSYAKATHNTWAAMLPSGGLKADDGESGAGM
VILRMMEREALSNHVIIVTRWYGGKKLGGDRFRRVQDAVRAYLDAG
>Mature_125_residues
TKKTEAAEKALTKLGVVLTDRGSKYAVSGAPVQSREEVDAVLSTLKEDRSYAKATHNTWAAMLPSGGLKADDGESGAGMV
ILRMMEREALSNHVIIVTRWYGGKKLGGDRFRRVQDAVRAYLDAG

Specific function: Unknown

COG id: COG1739

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI8923819, Length=114, Percent_Identity=37.719298245614, Blast_Score=82, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI71995232, Length=131, Percent_Identity=37.4045801526718, Blast_Score=82, Evalue=5e-17,
Organism=Saccharomyces cerevisiae, GI6319904, Length=108, Percent_Identity=35.1851851851852, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13656; Mature: 13525

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: PS00910 UPF0029

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKKTEAAEKALTKLGVVLTDRGSKYAVSGAPVQSREEVDAVLSTLKEDRSYAKATHNTW
CCCCHHHHHHHHHHHHHEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCH
AAMLPSGGLKADDGESGAGMVILRMMEREALSNHVIIVTRWYGGKKLGGDRFRRVQDAVR
HEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHH
AYLDAG
HHHCCC
>Mature Secondary Structure 
TKKTEAAEKALTKLGVVLTDRGSKYAVSGAPVQSREEVDAVLSTLKEDRSYAKATHNTW
CCCHHHHHHHHHHHHHEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCH
AAMLPSGGLKADDGESGAGMVILRMMEREALSNHVIIVTRWYGGKKLGGDRFRRVQDAVR
HEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHH
AYLDAG
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA