Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99080537

Identifier: 99080537

GI number: 99080537

Start: 747262

End: 747540

Strand: Direct

Name: 99080537

Synonym: TM1040_0696

Alternate gene names: NA

Gene position: 747262-747540 (Clockwise)

Preceding gene: 99080534

Following gene: 99080539

Centisome position: 23.35

GC content: 62.37

Gene sequence:

>279_bases
ATGGCAAAACCAAAGGCACGAGATTTGGCGGATCTTCGGGACCTTGCGCAACCCGGGGCGCAGATCGCTGTACGAGTGAC
GCCCAAGGCGGCGCAGAACGCGGTGCTGCGCAAGCGGGATGAGATCAAGGTGCTGGTCACAACGGTCCCGGAAGGGGGCA
AGGCAAATGCTGATGTGGTCGCACTTCTGTCCCGCGCACTCGGGGTCTCACCGTCGCGGCTGACACTCCTGCGTGGTGCG
ACAAGTCGCGACAAGGTCTTTCTTGTCACCGCCCCTTGA

Upstream 100 bases:

>100_bases
TTGCACAGAGGATCCCGCGTCAGAGCGCATATGGACGATCGGGTGACGGATCAGGCCGCGCACGCGGCGTTGGCGCCGGG
AGATTAGGACGGGTGGAGGC

Downstream 100 bases:

>100_bases
GTTGTTCCGGCTAGGCACCGGGATAGGTCCTGTCGCGATCACCGGGAGAGGTGCGGGTTTGCCGCATCATGGCGCTGAGG
CGCTCTGCAGCGCGCCTCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 92; Mature: 91

Protein sequence:

>92_residues
MAKPKARDLADLRDLAQPGAQIAVRVTPKAAQNAVLRKRDEIKVLVTTVPEGGKANADVVALLSRALGVSPSRLTLLRGA
TSRDKVFLVTAP

Sequences:

>Translated_92_residues
MAKPKARDLADLRDLAQPGAQIAVRVTPKAAQNAVLRKRDEIKVLVTTVPEGGKANADVVALLSRALGVSPSRLTLLRGA
TSRDKVFLVTAP
>Mature_91_residues
AKPKARDLADLRDLAQPGAQIAVRVTPKAAQNAVLRKRDEIKVLVTTVPEGGKANADVVALLSRALGVSPSRLTLLRGAT
SRDKVFLVTAP

Specific function: Unknown

COG id: COG1872

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0235 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003746 [H]

Pfam domain/function: PF02594 DUF167 [H]

EC number: NA

Molecular weight: Translated: 9725; Mature: 9593

Theoretical pI: Translated: 11.59; Mature: 11.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKPKARDLADLRDLAQPGAQIAVRVTPKAAQNAVLRKRDEIKVLVTTVPEGGKANADVV
CCCCCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHH
ALLSRALGVSPSRLTLLRGATSRDKVFLVTAP
HHHHHHHCCCCCCEEEEECCCCCCEEEEEECC
>Mature Secondary Structure 
AKPKARDLADLRDLAQPGAQIAVRVTPKAAQNAVLRKRDEIKVLVTTVPEGGKANADVV
CCCCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHH
ALLSRALGVSPSRLTLLRGATSRDKVFLVTAP
HHHHHHHCCCCCCEEEEECCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA