Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99080525

Identifier: 99080525

GI number: 99080525

Start: 732884

End: 733126

Strand: Direct

Name: 99080525

Synonym: TM1040_0684

Alternate gene names: NA

Gene position: 732884-733126 (Clockwise)

Preceding gene: 99080524

Following gene: 99080526

Centisome position: 22.9

GC content: 57.2

Gene sequence:

>243_bases
TTGATGAATATCTCCCTGATCCTTGCGTGCATTTGGATCTTGGTCGCCAATGTGCTGGCGCTCATACCCTCGCGCGACAA
TCACTGGACACGCGCTTATGTACTGATCGCGATCGGCATACCGCTGTTGGGCTATGTGACATATGAAAACGGCCCCTGGT
GGGGGCTGGCGATGCTGGTGGCCGGTATGTCGATCCTACGCTGGCCCGTGATTTACCTGTTGCGCTGGATGCGACGCGGC
TAG

Upstream 100 bases:

>100_bases
GCCGTATGGTCCGACATTGCGCCGACCAGACGGTAAGCGAAGCGCCGCGCTGCGGCGCCCAGTGCTGGAATTACGGCGGT
GGCAACGGGTGGAGGGCCAT

Downstream 100 bases:

>100_bases
GCGAGTGATGCTCGATCTCAGCGCGCTTGCCGCGCGGGCCTGCACGGGAATGTCGTTCTGAAGGCGCCCGAGATCGGACA
GAGGGGTTTTCCTCGCAATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 80; Mature: 80

Protein sequence:

>80_residues
MMNISLILACIWILVANVLALIPSRDNHWTRAYVLIAIGIPLLGYVTYENGPWWGLAMLVAGMSILRWPVIYLLRWMRRG

Sequences:

>Translated_80_residues
MMNISLILACIWILVANVLALIPSRDNHWTRAYVLIAIGIPLLGYVTYENGPWWGLAMLVAGMSILRWPVIYLLRWMRRG
>Mature_80_residues
MMNISLILACIWILVANVLALIPSRDNHWTRAYVLIAIGIPLLGYVTYENGPWWGLAMLVAGMSILRWPVIYLLRWMRRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9211; Mature: 9211

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
6.2 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNISLILACIWILVANVLALIPSRDNHWTRAYVLIAIGIPLLGYVTYENGPWWGLAMLV
CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHH
AGMSILRWPVIYLLRWMRRG
HHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMNISLILACIWILVANVLALIPSRDNHWTRAYVLIAIGIPLLGYVTYENGPWWGLAMLV
CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHH
AGMSILRWPVIYLLRWMRRG
HHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA