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The map label for this gene is ibpA [H]

Identifier: 99080451

GI number: 99080451

Start: 649537

End: 649950

Strand: Reverse

Name: ibpA [H]

Synonym: TM1040_0610

Alternate gene names: 99080451

Gene position: 649950-649537 (Counterclockwise)

Preceding gene: 99080453

Following gene: 99080450

Centisome position: 20.3

GC content: 57.0

Gene sequence:

>414_bases
GTGTCGAAACTTACCTTGGGCTCATACCCTCACATGCTGGGCTTCGAGCAACTGGAACGCCTGCTAGAGCGCTCTGCCAA
ATCTGGCAATGAGGGCTATCCTCCCTACAATATCGAACAGACATCTGACCATTCCTACCGCATCACCCTCGCTGTGGCCG
GATTCGCGGAAGAGGATCTGGCGATTACGGTCGAGGACAGGCAGCTGGTGATTCGTGGCCGACAGCGTGACGACTCGGAC
GGGCGCATCTTCCTGCATCGTGGGATCGCCGCACGCCAGTTTCAGCGCATGTTCGTTCTCGCGGATGGCGTCGAAGTCGG
GGAAGCCGTGATGGAGAACGGACTGCTTCATGTGGATCTCACGCGCTCACGTCCCGAAACCGTTGTGCAAACCATCAATA
TCAAAAAGGGGTAA

Upstream 100 bases:

>100_bases
GACTTGTGAAACGGCAAAAACATCCCATATCTTATAGCACAGCGGTTGCCAGATTGGGACCGCAAGAAACCGTCGCTTTC
GAATTAAGGACGAAGATACA

Downstream 100 bases:

>100_bases
ATCATGCAGACACCTGTAGAAATGGCTCAGGCTGGCGGTCGCACCGTCTACGTCAAGACTGTTGCAGTCGCCGATCTGCC
CAAGGATGTGCAGGCCTCCG

Product: heat shock protein Hsp20

Products: NA

Alternate protein names: 16 kDa heat shock protein A [H]

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MSKLTLGSYPHMLGFEQLERLLERSAKSGNEGYPPYNIEQTSDHSYRITLAVAGFAEEDLAITVEDRQLVIRGRQRDDSD
GRIFLHRGIAARQFQRMFVLADGVEVGEAVMENGLLHVDLTRSRPETVVQTINIKKG

Sequences:

>Translated_137_residues
MSKLTLGSYPHMLGFEQLERLLERSAKSGNEGYPPYNIEQTSDHSYRITLAVAGFAEEDLAITVEDRQLVIRGRQRDDSD
GRIFLHRGIAARQFQRMFVLADGVEVGEAVMENGLLHVDLTRSRPETVVQTINIKKG
>Mature_136_residues
SKLTLGSYPHMLGFEQLERLLERSAKSGNEGYPPYNIEQTSDHSYRITLAVAGFAEEDLAITVEDRQLVIRGRQRDDSDG
RIFLHRGIAARQFQRMFVLADGVEVGEAVMENGLLHVDLTRSRPETVVQTINIKKG

Specific function: Associates with aggregated proteins, together with IbpB, to stabilize and protect them from irreversible denaturation and extensive proteolysis during heat shock and oxidative stress. Aggregated proteins bound to the IbpAB complex are more efficiently ref

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

Organism=Escherichia coli, GI1790122, Length=119, Percent_Identity=45.3781512605042, Blast_Score=111, Evalue=2e-26,
Organism=Escherichia coli, GI87082316, Length=119, Percent_Identity=40.3361344537815, Blast_Score=104, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 15445; Mature: 15314

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKLTLGSYPHMLGFEQLERLLERSAKSGNEGYPPYNIEQTSDHSYRITLAVAGFAEEDL
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCE
AITVEDRQLVIRGRQRDDSDGRIFLHRGIAARQFQRMFVLADGVEVGEAVMENGLLHVDL
EEEEECCEEEEECCCCCCCCCEEEEECCCHHHHHHEEEEEECCCHHHHHHHHCCEEEEEE
TRSRPETVVQTINIKKG
CCCCCCCEEEEEECCCC
>Mature Secondary Structure 
SKLTLGSYPHMLGFEQLERLLERSAKSGNEGYPPYNIEQTSDHSYRITLAVAGFAEEDL
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCE
AITVEDRQLVIRGRQRDDSDGRIFLHRGIAARQFQRMFVLADGVEVGEAVMENGLLHVDL
EEEEECCEEEEECCCCCCCCCEEEEECCCHHHHHHEEEEEECCCHHHHHHHHCCEEEEEE
TRSRPETVVQTINIKKG
CCCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA