| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
Click here to switch to the map view.
The map label for this gene is groES [H]
Identifier: 99080437
GI number: 99080437
Start: 637635
End: 637922
Strand: Direct
Name: groES [H]
Synonym: TM1040_0596
Alternate gene names: 99080437
Gene position: 637635-637922 (Clockwise)
Preceding gene: 99080436
Following gene: 99080438
Centisome position: 19.92
GC content: 57.64
Gene sequence:
>288_bases ATGGCATTGAAACCGCTTCATGACCGTGTGCTGGTTCGCCGTACCGAAAGCGAAGAAAAAACCGCAGGTGGTCTGATCAT TCCCGACAGCGCCAAGGAAAAACCGTCCGAGGGCGTTGTTGTCGCGTGTGGCGAAGGCGCGCGCAAGGACAGCGGCGAGC TGATCGCGATGGCCGTGAAAGAGGGTGACAACATCCTGTTCGGCAAATGGTCCGGCACCGAAGTCACCGTCGACGGCGAA GAGCTGCTGATGATGAAAGAGAGCGACATCATGGGTGTGATCGTCTGA
Upstream 100 bases:
>100_bases CCGCAGTTAGCACTCGACTGAGGTGAGTGCTAACGTCTCCGCGGCCCATGATGGGCGTGGGGAAAGGAAAACACTTTGAG CCTTTTGAGGAGCTGCAAAG
Downstream 100 bases:
>100_bases GCCTCGCTCCGACACATCCCACATCGCGTAACAAGACAGTATTCTCAAGGAGACTGAATAATGGCTGCTAAGGACGTCAA ATTCGACACCGATGCCCGCA
Product: co-chaperonin GroES
Products: NA
Alternate protein names: GroES protein; Protein Cpn10 [H]
Number of amino acids: Translated: 95; Mature: 94
Protein sequence:
>95_residues MALKPLHDRVLVRRTESEEKTAGGLIIPDSAKEKPSEGVVVACGEGARKDSGELIAMAVKEGDNILFGKWSGTEVTVDGE ELLMMKESDIMGVIV
Sequences:
>Translated_95_residues MALKPLHDRVLVRRTESEEKTAGGLIIPDSAKEKPSEGVVVACGEGARKDSGELIAMAVKEGDNILFGKWSGTEVTVDGE ELLMMKESDIMGVIV >Mature_94_residues ALKPLHDRVLVRRTESEEKTAGGLIIPDSAKEKPSEGVVVACGEGARKDSGELIAMAVKEGDNILFGKWSGTEVTVDGEE LLMMKESDIMGVIV
Specific function: Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter [H]
COG id: COG0234
COG function: function code O; Co-chaperonin GroES (HSP10)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GroES chaperonin family [H]
Homologues:
Organism=Homo sapiens, GI4504523, Length=91, Percent_Identity=37.3626373626374, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1790585, Length=95, Percent_Identity=42.1052631578947, Blast_Score=79, Evalue=6e-17, Organism=Caenorhabditis elegans, GI17555568, Length=93, Percent_Identity=44.0860215053763, Blast_Score=90, Evalue=2e-19, Organism=Saccharomyces cerevisiae, GI6324594, Length=91, Percent_Identity=34.0659340659341, Blast_Score=62, Evalue=2e-11, Organism=Drosophila melanogaster, GI21356029, Length=90, Percent_Identity=43.3333333333333, Blast_Score=75, Evalue=6e-15, Organism=Drosophila melanogaster, GI21358317, Length=89, Percent_Identity=42.6966292134831, Blast_Score=75, Evalue=1e-14,
Paralogues:
None
Copy number: 980 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 5720 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 1274 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020818 - InterPro: IPR018369 - InterPro: IPR011032 [H]
Pfam domain/function: PF00166 Cpn10 [H]
EC number: NA
Molecular weight: Translated: 10171; Mature: 10040
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: PS00681 CHAPERONINS_CPN10
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALKPLHDRVLVRRTESEEKTAGGLIIPDSAKEKPSEGVVVACGEGARKDSGELIAMAVK CCCCCCCCEEEEEECCCCCCCCCCEEECCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEE EGDNILFGKWSGTEVTVDGEELLMMKESDIMGVIV CCCEEEEEECCCCEEEECHHHEEEEECCCEEEEEC >Mature Secondary Structure ALKPLHDRVLVRRTESEEKTAGGLIIPDSAKEKPSEGVVVACGEGARKDSGELIAMAVK CCCCCCCEEEEEECCCCCCCCCCEEECCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEE EGDNILFGKWSGTEVTVDGEELLMMKESDIMGVIV CCCEEEEEECCCCEEEECHHHEEEEECCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA