Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99080436

Identifier: 99080436

GI number: 99080436

Start: 636662

End: 637360

Strand: Direct

Name: 99080436

Synonym: TM1040_0595

Alternate gene names: NA

Gene position: 636662-637360 (Clockwise)

Preceding gene: 99080432

Following gene: 99080437

Centisome position: 19.89

GC content: 63.09

Gene sequence:

>699_bases
ATGGCCGGGATGGAACGTGAACAGGATCTCTACGCCCCGGTCAAAGCGCTGCTGGAGGCTCAAGGTTACGCGGTAAAAGG
CGAGATCGGGGCCGCAGATGTCGTCGCCCTGCGCGGCGAGGAGCCGCCCGTCATTGTGGAACTCAAGCTTCGTTTTTCGC
TGGCCCTGTTTCATCAGGCGATCGAACGGCTGAAAGTCTCGGATACAGTCTATGTTGCAGTGGCGCGTCCAACTGGGAAA
ACCGCACGTCGGGCCTTGAAGGACAATCTCGCACTGTGTCGCCGCCTCGGTCTCGGGCTGATTACCGTGCGCGCCGATGG
GCGCACCGAGGTCCATTGCGATCCGGGCCCCTATGCCCCGCGCAAATCACCCTCGAAAAGCGTCCGCCTCTTGCGCGAGT
TTTCGCGCATCAATGGCGATCCCAATGCCGGGGGGGCAATCCGTGGTGGCCTGATGACCGGCTACCGTCAGGACGCGCTC
GCCTGTGTCAGCTACCTGCAGGAGCATGGTCCGGCCCGCGGCGCCGACATCGCCAAGGCCAAAGGCGTCAGCCGCGCCAC
GCATGTGCTCTATACCAACCACTACGGCTGGTTCGAACGCGTGACGAAGGGCGTCTACGGCCTTACCGACAAAGGGCGCG
TAGAGCCGCTTGACTGGTTCGCCTCCGCAGCTGTTTCCGCAACGCCCCGACCTAAGTGA

Upstream 100 bases:

>100_bases
TGTCACCGGAGCGTTGCGCGCGGGAAAGCAATCTGTTCATGGTATTCCGCATAAAAATCAGTCTCGGACACATTGCCATT
GAGACCGAGCCGGGGCAAGC

Downstream 100 bases:

>100_bases
GAGGGCCATATGAGAGGGCGTTGACCGCCTTCTTCTAACTTGAAATATCCCGGGGAGCGCGAGGGGCAGCGCCCCTCGTA
GTCACAGCCGGTTTTGCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 232; Mature: 231

Protein sequence:

>232_residues
MAGMEREQDLYAPVKALLEAQGYAVKGEIGAADVVALRGEEPPVIVELKLRFSLALFHQAIERLKVSDTVYVAVARPTGK
TARRALKDNLALCRRLGLGLITVRADGRTEVHCDPGPYAPRKSPSKSVRLLREFSRINGDPNAGGAIRGGLMTGYRQDAL
ACVSYLQEHGPARGADIAKAKGVSRATHVLYTNHYGWFERVTKGVYGLTDKGRVEPLDWFASAAVSATPRPK

Sequences:

>Translated_232_residues
MAGMEREQDLYAPVKALLEAQGYAVKGEIGAADVVALRGEEPPVIVELKLRFSLALFHQAIERLKVSDTVYVAVARPTGK
TARRALKDNLALCRRLGLGLITVRADGRTEVHCDPGPYAPRKSPSKSVRLLREFSRINGDPNAGGAIRGGLMTGYRQDAL
ACVSYLQEHGPARGADIAKAKGVSRATHVLYTNHYGWFERVTKGVYGLTDKGRVEPLDWFASAAVSATPRPK
>Mature_231_residues
AGMEREQDLYAPVKALLEAQGYAVKGEIGAADVVALRGEEPPVIVELKLRFSLALFHQAIERLKVSDTVYVAVARPTGKT
ARRALKDNLALCRRLGLGLITVRADGRTEVHCDPGPYAPRKSPSKSVRLLREFSRINGDPNAGGAIRGGLMTGYRQDALA
CVSYLQEHGPARGADIAKAKGVSRATHVLYTNHYGWFERVTKGVYGLTDKGRVEPLDWFASAAVSATPRPK

Specific function: Unknown

COG id: COG5482

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25195; Mature: 25064

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGMEREQDLYAPVKALLEAQGYAVKGEIGAADVVALRGEEPPVIVELKLRFSLALFHQA
CCCCCCHHHHHHHHHHHHHHCCCEEECCCCCCEEEEECCCCCCEEEEEEHHHHHHHHHHH
IERLKVSDTVYVAVARPTGKTARRALKDNLALCRRLGLGLITVRADGRTEVHCDPGPYAP
HHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEECCCCCCC
RKSPSKSVRLLREFSRINGDPNAGGAIRGGLMTGYRQDALACVSYLQEHGPARGADIAKA
CCCHHHHHHHHHHHHHCCCCCCCCCCEECCHHHCHHHHHHHHHHHHHHCCCCCCCCHHHH
KGVSRATHVLYTNHYGWFERVTKGVYGLTDKGRVEPLDWFASAAVSATPRPK
CCCCHHEEEEEECCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
AGMEREQDLYAPVKALLEAQGYAVKGEIGAADVVALRGEEPPVIVELKLRFSLALFHQA
CCCCCHHHHHHHHHHHHHHCCCEEECCCCCCEEEEECCCCCCEEEEEEHHHHHHHHHHH
IERLKVSDTVYVAVARPTGKTARRALKDNLALCRRLGLGLITVRADGRTEVHCDPGPYAP
HHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEECCCCCCC
RKSPSKSVRLLREFSRINGDPNAGGAIRGGLMTGYRQDALACVSYLQEHGPARGADIAKA
CCCHHHHHHHHHHHHHCCCCCCCCCCEECCHHHCHHHHHHHHHHHHHHCCCCCCCCHHHH
KGVSRATHVLYTNHYGWFERVTKGVYGLTDKGRVEPLDWFASAAVSATPRPK
CCCCHHEEEEEECCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA