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The map label for this gene is 99080413

Identifier: 99080413

GI number: 99080413

Start: 608877

End: 609461

Strand: Direct

Name: 99080413

Synonym: TM1040_0572

Alternate gene names: NA

Gene position: 608877-609461 (Clockwise)

Preceding gene: 99080407

Following gene: 99080414

Centisome position: 19.02

GC content: 61.88

Gene sequence:

>585_bases
ATGGGCAAAACGCGGACGAATCTCAAAGCTATCGTGGCGGCAATCTCTCTTGGCGTCATCCCTTGTTTGCCTTCAATTTC
GATGGCGCAGGAAGACGCGCATCGCATACCACAAACCGAGGCCGACCTGTTGGAGCGTTTGCGCGCCGCGGACCCGGCAG
ACGCCGCACGGATAGCCCGCGAGTTGCAGGCCGAGTGGAGCAAGAGCGGCTCGGCGGCGATGGACCTTCTGTTGCGCCGG
GGGCGTGAGGCCATGGCGCGGCAGGATTGGCAAGCCGCCATCGAGCATTTCACAGCCCTCACCGACCATGCGCCGGAGTT
TGCCGAGGGCTGGTCAGAGCGGGCGCGCGCCTTCTTTAACGCGGAACTCTTTGGTCCCGCTGTTGCTGATCTCGAGCGGG
CCTTGGCCTTGAACCCCAATGACTTCAACGCCATCTTCGGCCTCGGGCAGGTGTTTGAGTTCTTTGGCGATCCGGAGCGC
GCCTATGCCGCCTATGAGCGAGCCGAGGCTATACATCCGCATCACGAGGAAGTAACCAAGGCTCTGGATCGGCTTTCCAC
TAAGGTGGAGGGGCAGGCTCTCTAA

Upstream 100 bases:

>100_bases
TGTCGTCTTTCCTTGGTGGTGTTTCATGCCTTCGCACAAAACTGTGAAGCCGTTTGTTCTGGCACTGGTAATTCCGCCCC
GTGCCGCTACCCTTTGGACT

Downstream 100 bases:

>100_bases
GACAGCCCGCCATGACAACGATCCCTGAATTTATGTCCGGATCGGTCCCCTGGTGGACAGATCAATGCGCGTGGAGACTG
ATGCAATGACGACTGCATCC

Product: tetratricopeptide TPR_2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 193

Protein sequence:

>194_residues
MGKTRTNLKAIVAAISLGVIPCLPSISMAQEDAHRIPQTEADLLERLRAADPADAARIARELQAEWSKSGSAAMDLLLRR
GREAMARQDWQAAIEHFTALTDHAPEFAEGWSERARAFFNAELFGPAVADLERALALNPNDFNAIFGLGQVFEFFGDPER
AYAAYERAEAIHPHHEEVTKALDRLSTKVEGQAL

Sequences:

>Translated_194_residues
MGKTRTNLKAIVAAISLGVIPCLPSISMAQEDAHRIPQTEADLLERLRAADPADAARIARELQAEWSKSGSAAMDLLLRR
GREAMARQDWQAAIEHFTALTDHAPEFAEGWSERARAFFNAELFGPAVADLERALALNPNDFNAIFGLGQVFEFFGDPER
AYAAYERAEAIHPHHEEVTKALDRLSTKVEGQAL
>Mature_193_residues
GKTRTNLKAIVAAISLGVIPCLPSISMAQEDAHRIPQTEADLLERLRAADPADAARIARELQAEWSKSGSAAMDLLLRRG
REAMARQDWQAAIEHFTALTDHAPEFAEGWSERARAFFNAELFGPAVADLERALALNPNDFNAIFGLGQVFEFFGDPERA
YAAYERAEAIHPHHEEVTKALDRLSTKVEGQAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21394; Mature: 21263

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKTRTNLKAIVAAISLGVIPCLPSISMAQEDAHRIPQTEADLLERLRAADPADAARIAR
CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHH
ELQAEWSKSGSAAMDLLLRRGREAMARQDWQAAIEHFTALTDHAPEFAEGWSERARAFFN
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
AELFGPAVADLERALALNPNDFNAIFGLGQVFEFFGDPERAYAAYERAEAIHPHHEEVTK
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHH
ALDRLSTKVEGQAL
HHHHHHHHCCCCCC
>Mature Secondary Structure 
GKTRTNLKAIVAAISLGVIPCLPSISMAQEDAHRIPQTEADLLERLRAADPADAARIAR
CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHH
ELQAEWSKSGSAAMDLLLRRGREAMARQDWQAAIEHFTALTDHAPEFAEGWSERARAFFN
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
AELFGPAVADLERALALNPNDFNAIFGLGQVFEFFGDPERAYAAYERAEAIHPHHEEVTK
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHH
ALDRLSTKVEGQAL
HHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA