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The map label for this gene is pcaC [H]

Identifier: 99080400

GI number: 99080400

Start: 595854

End: 596258

Strand: Reverse

Name: pcaC [H]

Synonym: TM1040_0559

Alternate gene names: 99080400

Gene position: 596258-595854 (Counterclockwise)

Preceding gene: 99080401

Following gene: 99080399

Centisome position: 18.63

GC content: 59.26

Gene sequence:

>405_bases
ATGTCTGATTGCCCTTCGAATGACCGCTACGGCGCCGGAATGGCGGTCCGTCGCAAGATTTTGGGCGACGCCCATGTGGA
CCGTGCCGAAGCTGCCAAAACCGCATTTGATGAGCCATTTCAAACACTGATCACTGAAACCGCCTGGGGCAACGTCTGGG
CCAGCGATGGAGTCTCGGACCGCGAACGCTCCATGCTGACACTCGCACTGTTGGCAGCGCTTGGGAACTTTGACGAGATC
CCCATGCATATCCGCGCCACGGCCCGAACCGGCGCCAGCAAGACCGACGTGCTTGAGGCCTTTCAGCATGTCGCGGTCTA
TGCAGGGGTGCCACGCGCAAATCATGCGCTGAAACTGGCCAAGGAAACCTATGCCGAAATGGACCGGGAGGACCAACAGT
CATGA

Upstream 100 bases:

>100_bases
GCGCGTTTTAATGTGATCGAGGACAGCGGCCATCTGCCCTGTGTCGAAGCCCCGGACGCTTATGCAGGCATGCTGACGGA
TTTCATAAAGGAGCTGGGCC

Downstream 100 bases:

>100_bases
GCAACGGATATGTAAATCGCGACCGACGCTGGCATCCCCCCAGCATCACGCCCGATTATAAAACCTCCGTCGCGCGCGGG
CCGCGCCATGCGCCCTTGTC

Product: 4-carboxymuconolactone decarboxylase

Products: NA

Alternate protein names: CMD [H]

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MSDCPSNDRYGAGMAVRRKILGDAHVDRAEAAKTAFDEPFQTLITETAWGNVWASDGVSDRERSMLTLALLAALGNFDEI
PMHIRATARTGASKTDVLEAFQHVAVYAGVPRANHALKLAKETYAEMDREDQQS

Sequences:

>Translated_134_residues
MSDCPSNDRYGAGMAVRRKILGDAHVDRAEAAKTAFDEPFQTLITETAWGNVWASDGVSDRERSMLTLALLAALGNFDEI
PMHIRATARTGASKTDVLEAFQHVAVYAGVPRANHALKLAKETYAEMDREDQQS
>Mature_133_residues
SDCPSNDRYGAGMAVRRKILGDAHVDRAEAAKTAFDEPFQTLITETAWGNVWASDGVSDRERSMLTLALLAALGNFDEIP
MHIRATARTGASKTDVLEAFQHVAVYAGVPRANHALKLAKETYAEMDREDQQS

Specific function: Unknown

COG id: COG0599

COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003779
- InterPro:   IPR012788 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: =4.1.1.44 [H]

Molecular weight: Translated: 14682; Mature: 14550

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDCPSNDRYGAGMAVRRKILGDAHVDRAEAAKTAFDEPFQTLITETAWGNVWASDGVSD
CCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH
RERSMLTLALLAALGNFDEIPMHIRATARTGASKTDVLEAFQHVAVYAGVPRANHALKLA
HHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHH
KETYAEMDREDQQS
HHHHHHHCHHCCCC
>Mature Secondary Structure 
SDCPSNDRYGAGMAVRRKILGDAHVDRAEAAKTAFDEPFQTLITETAWGNVWASDGVSD
CCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH
RERSMLTLALLAALGNFDEIPMHIRATARTGASKTDVLEAFQHVAVYAGVPRANHALKLA
HHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHH
KETYAEMDREDQQS
HHHHHHHCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2298704 [H]